Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS25735

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
1,112,489	+		RR42_RS25725	0.56	-0.5
1,112,490	-		RR42_RS25725	0.57	+1.1
1,112,611	+		RR42_RS25725	0.75	-2.1
1,112,612	-		RR42_RS25725	0.75	+1.2
1,112,823	+				+0.0
1,112,823	+				-0.1
1,113,117	+		RR42_RS25730	0.46	-1.0
1,113,118	-		RR42_RS25730	0.46	-2.1
1,113,118	-		RR42_RS25730	0.46	-1.1
1,113,149	+		RR42_RS25730	0.50	+0.9
1,113,149	+		RR42_RS25730	0.50	-0.2
1,113,149	+		RR42_RS25730	0.50	+1.3
1,113,150	-		RR42_RS25730	0.51	-0.9
1,113,150	-		RR42_RS25730	0.51	+2.1
1,113,582	-				+1.1
1,113,584	+				-1.0
1,113,584	+				+0.5
1,113,585	-				+0.5
1,113,585	-				-0.4
1,113,835	+		RR42_RS25735	0.12	+0.8
1,114,644	+		RR42_RS25735	0.39	+0.1
1,115,164	+		RR42_RS25735	0.57	-1.4
1,115,672	+		RR42_RS25735	0.74	+1.8
1,115,852	+		RR42_RS25735	0.80	+0.1
1,115,852	+		RR42_RS25735	0.80	+0.9
1,115,852	+		RR42_RS25735	0.80	+0.2
1,115,852	+		RR42_RS25735	0.80	+0.2
1,115,852	+		RR42_RS25735	0.80	-0.6
1,116,265	+				-0.4
1,116,265	+				-2.4
1,116,265	+				+0.3
1,116,265	+				+0.8
1,116,266	-				+1.0
1,116,266	-				-0.3
1,116,266	-				-0.2
1,116,266	-				-0.0
1,116,266	-				+1.4
1,116,266	-				+0.1
1,116,266	-				+0.4
1,116,266	-				+0.3
1,116,266	-				-1.5
1,116,266	-				-0.2
1,116,266	-				+0.6
1,116,299	+				-1.2
1,116,329	+				+0.1
1,116,329	+				+1.3
1,116,329	+				-0.4
1,116,329	+				-1.1
1,116,330	-				+0.8
1,116,330	-				+0.3
1,116,330	-				-0.7
1,116,330	-				+0.4
1,116,330	-				-1.0
1,116,438	+				+0.1
1,116,438	+				-1.9
1,116,439	-				+0.2
1,116,440	-				-0.3
1,116,443	+				+0.6
1,116,444	-				-0.0
1,116,444	-				+1.1
1,116,465	-				-0.2
1,116,513	+				+0.9
1,116,543	+		RR42_RS25740	0.11	+0.2
1,116,623	-		RR42_RS25740	0.22	-0.7
1,116,837	-		RR42_RS25740	0.50	-0.3
1,116,848	+		RR42_RS25740	0.52	-0.6
1,116,849	-		RR42_RS25740	0.52	-2.6
1,116,849	-		RR42_RS25740	0.52	-0.9
1,117,235	-				+0.1
1,117,283	+				+0.3
1,117,390	+				+0.6