Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS20805

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
4,514,586	+				-0.5
4,514,652	+		RR42_RS20800	0.11	-0.5
4,514,652	+		RR42_RS20800	0.11	-0.4
4,514,685	+		RR42_RS20800	0.15	-0.1
4,514,686	-		RR42_RS20800	0.15	+0.6
4,514,740	+		RR42_RS20800	0.21	+0.9
4,514,934	+		RR42_RS20800	0.45	-1.7
4,514,934	+		RR42_RS20800	0.45	-0.9
4,514,934	+		RR42_RS20800	0.45	-0.7
4,514,934	+		RR42_RS20800	0.45	-0.7
4,514,935	-		RR42_RS20800	0.45	-0.6
4,514,935	-		RR42_RS20800	0.45	-0.2
4,514,935	-		RR42_RS20800	0.45	+1.1
4,514,935	-		RR42_RS20800	0.45	+0.8
4,514,935	-		RR42_RS20800	0.45	+0.6
4,514,935	-		RR42_RS20800	0.45	-0.3
4,514,997	+		RR42_RS20800	0.52	-0.7
4,515,088	-		RR42_RS20800	0.63	+0.1
4,515,088	-		RR42_RS20800	0.63	-0.0
4,515,222	+		RR42_RS20800	0.79	-0.4
4,515,222	+		RR42_RS20800	0.79	+4.6
4,515,234	+		RR42_RS20800	0.81	-1.8
4,515,234	+		RR42_RS20800	0.81	+1.1
4,515,234	+		RR42_RS20800	0.81	+0.9
4,515,234	+		RR42_RS20800	0.81	+1.1
4,515,235	-		RR42_RS20800	0.81	+0.2
4,515,255	+		RR42_RS20800	0.83	+0.4
4,515,255	+		RR42_RS20800	0.83	+0.3
4,515,255	+		RR42_RS20800	0.83	-0.5
4,515,256	-		RR42_RS20800	0.84	+0.5
4,515,256	-		RR42_RS20800	0.84	+0.3
4,515,256	-		RR42_RS20800	0.84	+0.5
4,515,256	-		RR42_RS20800	0.84	-1.4
4,515,327	+				+0.2
4,515,327	+				-0.3
4,515,328	-				+0.4
4,515,328	-				+0.6
4,515,328	-				-0.3
4,515,328	-				-0.6
4,515,443	+				+0.1
4,515,444	-				+1.1
4,515,444	-				+0.2
4,515,444	-				-1.2
4,515,444	-				-0.2
4,515,444	-				-0.3
4,516,649	+		RR42_RS20805	0.83	-0.7
4,517,123	-		RR42_RS20810	0.13	+1.0
4,517,162	-		RR42_RS20810	0.18	+0.4
4,517,617	-		RR42_RS20810	0.77	+0.7
4,517,814	+				-0.1
4,517,814	+				+0.3
4,517,814	+				+0.7
4,517,815	-				+1.6
4,517,818	+				+0.4
4,517,819	-				-2.5
4,517,819	-				+0.5
4,517,829	-				+1.7
4,517,829	-				+0.6