Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS20550

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
4,453,394	+				+0.6
4,453,394	+				-1.0
4,453,394	+				-1.3
4,453,395	-				+0.0
4,453,395	-				+0.2
4,453,460	-				-0.1
4,453,460	-				-1.8
4,453,460	-				-1.2
4,453,460	-				-1.0
4,453,460	-				+0.2
4,453,460	-				-0.8
4,453,674	+		RR42_RS20545	0.35	-1.9
4,453,674	+		RR42_RS20545	0.35	-2.0
4,453,674	+		RR42_RS20545	0.35	-0.6
4,453,675	-		RR42_RS20545	0.35	-0.9
4,453,675	-		RR42_RS20545	0.35	-0.6
4,453,680	+		RR42_RS20545	0.36	+0.9
4,453,695	+		RR42_RS20545	0.39	+1.1
4,453,695	+		RR42_RS20545	0.39	+0.5
4,453,695	+		RR42_RS20545	0.39	-0.6
4,453,695	+		RR42_RS20545	0.39	-0.7
4,453,696	-		RR42_RS20545	0.39	-1.1
4,453,696	-		RR42_RS20545	0.39	-0.4
4,453,696	-		RR42_RS20545	0.39	-1.1
4,453,696	-		RR42_RS20545	0.39	+0.5
4,453,878	+		RR42_RS20545	0.68	-0.8
4,453,879	-		RR42_RS20545	0.68	+0.5
4,453,922	+		RR42_RS20545	0.75	-1.1
4,453,922	+		RR42_RS20545	0.75	-3.3
4,453,922	+		RR42_RS20545	0.75	+0.5
4,453,923	-		RR42_RS20545	0.75	-0.7
4,453,923	-		RR42_RS20545	0.75	+0.3
4,453,923	-		RR42_RS20545	0.75	+0.8
4,453,923	-		RR42_RS20545	0.75	-2.2
4,453,923	-		RR42_RS20545	0.75	+0.3
4,453,923	-		RR42_RS20545	0.75	-0.1
4,453,923	-		RR42_RS20545	0.75	-0.7
4,453,950	+		RR42_RS20545	0.79	-1.3
4,453,951	-		RR42_RS20545	0.79	+0.7
4,454,083	-				+0.4
4,454,123	+				+2.6
4,454,126	+				-2.6
4,454,126	+				+1.3
4,454,126	+				+0.1
4,454,126	+				-0.0
4,454,126	+				+0.6
4,454,127	-				+0.9
4,454,127	-				-0.2
4,454,127	-				+0.0
4,454,127	-				-1.3
4,454,127	-				-0.7
4,454,133	+				-1.0
4,454,134	-				+0.2
4,454,181	+				+0.6
4,454,182	-				-0.3
4,454,184	+				+0.1
4,454,184	+				-0.2
4,454,184	+				+0.5
4,454,184	+				-1.1
4,454,184	+				-1.9
4,454,185	-				-0.4
4,454,185	-				-1.7
4,454,185	-				-0.4
4,454,185	-				-0.6
4,454,185	-				+0.1
4,454,187	+				+0.2
4,454,188	-				-0.2
4,454,264	+				-0.8
4,454,264	+				+0.5
4,454,265	-				-0.3
4,454,265	-				-0.4
4,454,323	+				-0.6
4,454,324	-				-0.2
4,454,593	+		RR42_RS20550	0.25	-0.9
4,454,594	-		RR42_RS20550	0.25	-1.1
4,454,594	-		RR42_RS20550	0.25	-0.7
4,454,870	+		RR42_RS20550	0.47	-0.6
4,454,871	-		RR42_RS20550	0.47	-0.4
4,454,871	-		RR42_RS20550	0.47	-1.0
4,454,871	-		RR42_RS20550	0.47	+1.7
4,454,871	-		RR42_RS20550	0.47	-2.0
4,455,124	+		RR42_RS20550	0.67	-0.4
4,455,124	+		RR42_RS20550	0.67	-0.5
4,455,143	+		RR42_RS20550	0.69	-0.7
4,455,206	+		RR42_RS20550	0.74	+0.2
4,455,206	+		RR42_RS20550	0.74	-0.3
4,455,206	+		RR42_RS20550	0.74	+0.4
4,455,206	+		RR42_RS20550	0.74	-0.7
4,455,207	-		RR42_RS20550	0.74	-0.9
4,455,207	-		RR42_RS20550	0.74	-0.4
4,455,207	-		RR42_RS20550	0.74	-0.2
4,455,577	+				-0.7
4,455,606	+				+1.0
4,455,606	+				-0.3
4,455,606	+				-0.1
4,455,607	-				+2.0
4,455,642	-				-0.2
4,456,198	+		RR42_RS20555	0.20	+1.7
4,456,198	+		RR42_RS20555	0.20	-0.2
4,456,199	-		RR42_RS20555	0.20	+0.5
4,456,199	-		RR42_RS20555	0.20	-1.1
4,456,435	+		RR42_RS20555	0.27	-1.2
4,456,435	+		RR42_RS20555	0.27	-1.5
4,456,435	+		RR42_RS20555	0.27	+0.4
4,456,435	+		RR42_RS20555	0.27	-0.3
4,456,436	-		RR42_RS20555	0.27	+1.2