Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS19885

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
4,292,543	-				+1.0
4,292,575	+				-0.0
4,292,575	+				-0.6
4,292,595	+				-0.0
4,292,658	+				-0.5
4,292,855	+		RR42_RS19880	0.58	+0.6
4,292,872	-		RR42_RS19880	0.65	+1.0
4,292,873	+		RR42_RS19880	0.66	+1.1
4,292,873	+		RR42_RS19880	0.66	+0.1
4,292,873	+		RR42_RS19880	0.66	+1.2
4,292,874	-		RR42_RS19880	0.66	-1.0
4,292,874	-		RR42_RS19880	0.66	+0.3
4,293,011	+				+0.2
4,293,011	+				+0.4
4,293,011	+				+1.6
4,293,011	+				-1.3
4,293,011	+				-0.1
4,293,012	-				-2.4
4,293,044	+				+0.8
4,293,044	+				+2.4
4,293,194	+				-0.3
4,293,927	+		RR42_RS19885	0.13	-0.7
4,293,927	+		RR42_RS19885	0.13	-0.7
4,293,928	-		RR42_RS19885	0.13	-0.6
4,296,647	-				+0.4
4,296,697	+				+0.6
4,296,697	+				+0.3
4,296,697	+				-0.2
4,296,697	+				-1.2
4,296,698	-				+0.0
4,296,698	-				+1.0
4,296,698	-				-0.9
4,296,698	-				-0.3
4,296,698	-				-0.3
4,296,698	-				-2.0
4,296,778	-				+0.7
4,296,829	+				-0.7
4,296,829	+				-1.6
4,296,829	+				-0.3
4,296,829	+				-0.1
4,296,830	-				-0.1
4,296,830	-				-0.2
4,296,863	-				-1.4
4,297,022	+		RR42_RS19890	0.50	-0.6
4,297,022	+		RR42_RS19890	0.50	+0.4
4,297,023	-		RR42_RS19890	0.50	+0.8
4,297,023	-		RR42_RS19890	0.50	-0.6
4,297,058	+		RR42_RS19890	0.60	+0.1
4,297,058	+		RR42_RS19890	0.60	-0.8
4,297,058	+		RR42_RS19890	0.60	+3.6
4,297,091	-		RR42_RS19890	0.69	-0.2
4,297,247	+				-2.2
4,297,247	+				-1.0
4,297,250	+				+1.6
4,297,250	+				-1.7
4,297,250	+				-1.3
4,297,251	-				+0.1
4,297,251	-				+1.0
4,297,251	-				-0.4
4,297,251	-				-0.2
4,297,269	-				-0.6
4,297,269	-				+2.0
4,297,269	-				-1.7
4,297,299	-				+0.8
4,297,323	+				-0.0
4,297,323	+				-2.1
4,297,324	-				-1.1
4,297,324	-				-1.1
4,297,324	-				+0.3
4,297,324	-				+0.8
4,297,324	-				-0.1