Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS19865
Experiment: R2A with Vancomycin 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with Vancomycin 0.5 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,287,636 | - | -0.3 | |||
4,287,981 | + | RR42_RS19860 | 0.40 | -0.6 | |
4,288,313 | + | RR42_RS19860 | 0.76 | -0.2 | |
4,288,533 | + | -0.9 | |||
4,288,574 | - | +0.1 | |||
4,288,793 | + | RR42_RS19865 | 0.13 | -0.3 | |
4,288,793 | + | RR42_RS19865 | 0.13 | -3.0 | |
4,289,108 | + | RR42_RS19865 | 0.37 | -0.4 | |
4,289,109 | - | RR42_RS19865 | 0.37 | -0.4 | |
4,289,109 | - | RR42_RS19865 | 0.37 | -1.9 | |
4,289,320 | + | RR42_RS19865 | 0.53 | -0.5 | |
4,289,320 | + | RR42_RS19865 | 0.53 | -0.2 | |
4,289,321 | - | RR42_RS19865 | 0.53 | -1.3 | |
4,289,935 | + | -2.1 | |||
4,290,899 | + | RR42_RS19870 | 0.61 | -0.4 | |
4,290,900 | - | RR42_RS19870 | 0.61 | +2.6 | |
4,290,900 | - | RR42_RS19870 | 0.61 | +0.4 | |
4,290,900 | - | RR42_RS19870 | 0.61 | +0.1 |
Or see this region's nucleotide sequence