Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS17930

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
3,880,338	-				-1.7
3,880,338	-				+0.0
3,880,338	-				-1.8
3,880,535	+		RR42_RS17930	0.24	+0.2
3,880,536	-		RR42_RS17930	0.24	-1.1
3,880,536	-		RR42_RS17930	0.24	-0.2
3,880,536	-		RR42_RS17930	0.24	-1.2
3,880,649	-		RR42_RS17930	0.41	-0.9
3,880,759	+		RR42_RS17930	0.58	+0.2
3,880,759	+		RR42_RS17930	0.58	-0.9
3,880,805	-		RR42_RS17930	0.65	-0.7
3,880,848	+		RR42_RS17930	0.71	-0.4
3,880,909	+		RR42_RS17930	0.81	+0.8
3,881,037	-				+0.3
3,881,171	+		RR42_RS17935	0.22	+0.1
3,881,172	-		RR42_RS17935	0.23	-1.7
3,881,361	-		RR42_RS17935	0.53	-1.2
3,881,362	+		RR42_RS17935	0.53	-0.1
3,881,362	+		RR42_RS17935	0.53	-0.9
3,881,362	+		RR42_RS17935	0.53	+0.1
3,881,362	+		RR42_RS17935	0.53	+0.3
3,881,362	+		RR42_RS17935	0.53	-0.6
3,881,362	+		RR42_RS17935	0.53	-0.4
3,881,362	+		RR42_RS17935	0.53	+0.3
3,881,363	-		RR42_RS17935	0.53	+0.2
3,881,363	-		RR42_RS17935	0.53	+0.6
3,881,363	-		RR42_RS17935	0.53	+0.2
3,881,444	+		RR42_RS17935	0.66	-0.6
3,881,444	+		RR42_RS17935	0.66	-0.5
3,881,444	+		RR42_RS17935	0.66	-0.2
3,881,444	+		RR42_RS17935	0.66	+0.5
3,881,444	+		RR42_RS17935	0.66	+2.3
3,881,444	+		RR42_RS17935	0.66	-0.3
3,881,444	+		RR42_RS17935	0.66	-1.4
3,881,445	-		RR42_RS17935	0.66	-0.7
3,881,445	-		RR42_RS17935	0.66	+0.9
3,881,449	+		RR42_RS17935	0.67	-0.2
3,881,449	+		RR42_RS17935	0.67	-0.5
3,881,449	+		RR42_RS17935	0.67	-0.6
3,881,450	-		RR42_RS17935	0.67	+0.8
3,881,450	-		RR42_RS17935	0.67	+1.4
3,881,540	+		RR42_RS17935	0.81	-2.0
3,881,540	+		RR42_RS17935	0.81	+0.6
3,881,540	+		RR42_RS17935	0.81	-2.2
3,881,540	+		RR42_RS17935	0.81	-1.1
3,881,540	+		RR42_RS17935	0.81	-0.3
3,881,540	+		RR42_RS17935	0.81	+0.4
3,881,540	+		RR42_RS17935	0.81	+1.6
3,881,540	+		RR42_RS17935	0.81	-0.0
3,881,540	+		RR42_RS17935	0.81	-0.4
3,881,540	+		RR42_RS17935	0.81	-1.1
3,881,540	+		RR42_RS17935	0.81	-0.7
3,881,541	-		RR42_RS17935	0.81	-1.3
3,881,541	-		RR42_RS17935	0.81	-0.1
3,881,541	-		RR42_RS17935	0.81	-1.4
3,881,541	-		RR42_RS17935	0.81	+1.0
3,881,541	-		RR42_RS17935	0.81	-0.9
3,881,541	-		RR42_RS17935	0.81	-0.1
3,881,541	-		RR42_RS17935	0.81	-0.7
3,881,677	+				-0.8
3,881,680	+				+0.1
3,881,854	+		RR42_RS17940	0.10	+1.0
3,881,855	-		RR42_RS17940	0.10	-0.6