Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS17910

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
3,875,035	+				-2.0
3,875,035	+				-0.7
3,875,053	+				-0.2
3,875,053	+				-0.2
3,875,053	+				-0.1
3,875,053	+				-0.8
3,875,054	-				+0.9
3,875,054	-				+2.2
3,875,059	-				+0.4
3,875,107	+				+0.5
3,875,274	+		RR42_RS17905	0.19	-0.1
3,875,274	+		RR42_RS17905	0.19	-0.2
3,875,332	+		RR42_RS17905	0.28	+0.3
3,875,392	+		RR42_RS17905	0.37	+1.2
3,875,392	+		RR42_RS17905	0.37	+0.9
3,875,392	+		RR42_RS17905	0.37	-2.0
3,875,392	+		RR42_RS17905	0.37	-0.4
3,875,392	+		RR42_RS17905	0.37	-1.1
3,875,393	-		RR42_RS17905	0.38	+0.5
3,875,440	-		RR42_RS17905	0.45	-0.2
3,875,456	-		RR42_RS17905	0.47	-2.2
3,875,456	-		RR42_RS17905	0.47	-0.4
3,875,569	+		RR42_RS17905	0.65	-0.7
3,875,570	-		RR42_RS17905	0.65	+0.4
3,875,652	-		RR42_RS17905	0.78	-0.2
3,875,731	-				+0.1
3,875,769	-				-0.4
3,875,886	+				+0.4
3,875,886	+				+0.2
3,875,886	+				-0.8
3,875,886	+				+0.6
3,875,887	-				+0.1
3,875,887	-				+1.1
3,875,887	-				+0.1
3,875,887	-				-0.5
3,875,931	+				-0.5
3,875,932	-				+1.4
3,876,078	+		RR42_RS17910	0.20	-0.4
3,876,129	+		RR42_RS17910	0.26	+0.7
3,876,375	+		RR42_RS17910	0.55	-1.8
3,876,375	+		RR42_RS17910	0.55	-0.6
3,876,375	+		RR42_RS17910	0.55	+0.4
3,876,375	+		RR42_RS17910	0.55	+0.8
3,876,375	+		RR42_RS17910	0.55	-1.1
3,876,375	+		RR42_RS17910	0.55	+0.4
3,876,376	-		RR42_RS17910	0.55	-0.1
3,876,376	-		RR42_RS17910	0.55	-0.5
3,876,376	-		RR42_RS17910	0.55	-0.2
3,876,376	-		RR42_RS17910	0.55	+0.5
3,876,376	-		RR42_RS17910	0.55	-0.8
3,876,379	+		RR42_RS17910	0.56	+0.2
3,876,379	+		RR42_RS17910	0.56	+0.9
3,876,379	+		RR42_RS17910	0.56	-0.1
3,876,380	-		RR42_RS17910	0.56	+0.7
3,876,380	-		RR42_RS17910	0.56	+0.8
3,876,489	+		RR42_RS17910	0.69	-0.8
3,876,644	-		RR42_RS17910	0.87	-2.0
3,876,693	+				-0.8
3,876,693	+				+0.1
3,876,693	+				+0.6
3,876,693	+				+0.7
3,876,694	-				-0.0
3,876,694	-				+0.1
3,876,694	-				-0.3
3,876,694	-				+0.1
3,876,694	-				-1.3
3,876,694	-				+0.6
3,876,694	-				+0.2
3,876,694	-				+1.0
3,876,718	-				+0.7
3,876,869	+		RR42_RS17915	0.12	+0.4
3,876,878	+		RR42_RS17915	0.13	+0.1
3,876,962	+		RR42_RS17915	0.22	+0.2
3,876,962	+		RR42_RS17915	0.22	+1.0
3,876,962	+		RR42_RS17915	0.22	-1.1
3,876,963	-		RR42_RS17915	0.22	+0.1
3,876,963	-		RR42_RS17915	0.22	-0.1
3,877,043	+		RR42_RS17915	0.31	+0.2
3,877,055	+		RR42_RS17915	0.32	+1.1
3,877,073	+		RR42_RS17915	0.34	-1.3
3,877,073	+		RR42_RS17915	0.34	+0.5
3,877,073	+		RR42_RS17915	0.34	-0.8
3,877,073	+		RR42_RS17915	0.34	-0.4
3,877,073	+		RR42_RS17915	0.34	-1.3
3,877,074	-		RR42_RS17915	0.34	+0.1
3,877,074	-		RR42_RS17915	0.34	+0.7
3,877,273	+		RR42_RS17915	0.55	+0.6
3,877,273	+		RR42_RS17915	0.55	+1.1
3,877,273	+		RR42_RS17915	0.55	-1.4
3,877,313	+		RR42_RS17915	0.59	+0.6
3,877,314	-		RR42_RS17915	0.59	+1.3
3,877,384	-		RR42_RS17915	0.67	-0.9
3,877,384	-		RR42_RS17915	0.67	-0.1
3,877,655	+				-0.7