Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS17650

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
3,818,001	+				-0.0
3,818,001	+				+0.5
3,818,001	+				-0.1
3,818,001	+				-0.5
3,818,002	-				-2.2
3,818,084	+		RR42_RS17645	0.19	+0.1
3,818,084	+		RR42_RS17645	0.19	+0.6
3,818,085	-		RR42_RS17645	0.19	-0.3
3,818,085	-		RR42_RS17645	0.19	-0.0
3,818,103	+		RR42_RS17645	0.21	-0.4
3,818,103	+		RR42_RS17645	0.21	+0.3
3,818,104	-		RR42_RS17645	0.21	-0.4
3,818,115	+		RR42_RS17645	0.22	-0.6
3,818,131	+		RR42_RS17645	0.24	-0.9
3,818,269	-		RR42_RS17645	0.40	-1.6
3,818,435	-		RR42_RS17645	0.59	+1.0
3,818,571	+		RR42_RS17645	0.74	-0.6
3,818,572	-		RR42_RS17645	0.75	-0.4
3,818,766	+				-0.3
3,818,794	+				+3.6
3,818,794	+				+0.7
3,818,794	+				-0.5
3,818,794	+				+0.4
3,818,794	+				+2.6
3,818,795	-				+0.4
3,818,795	-				-0.1
3,818,795	-				-0.2
3,818,795	-				+0.4
3,818,908	-		RR42_RS17650	0.10	-0.4
3,819,008	+		RR42_RS17650	0.21	-0.1
3,819,022	-		RR42_RS17650	0.23	-0.3
3,819,146	+		RR42_RS17650	0.36	-0.8
3,819,147	-		RR42_RS17650	0.36	-0.2
3,819,147	-		RR42_RS17650	0.36	-1.4
3,819,150	-		RR42_RS17650	0.37	-0.9
3,819,158	+		RR42_RS17650	0.38	+0.2
3,819,215	+		RR42_RS17650	0.44	-1.5
3,819,216	-		RR42_RS17650	0.44	+1.1
3,819,814	+				+1.1
3,819,815	-				-0.8