Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS17555

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
3,798,746	-				+0.0
3,798,803	-				-0.6
3,798,805	-				-0.7
3,798,844	-				+0.2
3,798,844	-				-0.6
3,798,844	-				-0.6
3,798,844	-				-0.4
3,799,660	-				-0.5
3,799,660	-				+1.3
3,799,827	-		RR42_RS17555	0.22	-1.4
3,800,123	-		RR42_RS17555	0.74	+0.6
3,800,225	-				+0.2
3,800,269	-				-0.7
3,800,269	-				+0.2
3,800,269	-				-2.5
3,800,269	-				-3.6
3,800,280	-				+0.4
3,800,322	-				-0.3
3,800,446	+				-0.3
3,800,446	+				-0.4
3,800,446	+				-0.7
3,800,446	+				-2.6
3,800,446	+				-1.2
3,800,446	+				-1.0
3,800,446	+				-0.4
3,800,446	+				+0.2
3,800,447	-				+0.6
3,800,447	-				-1.2
3,800,447	-				-1.2
3,800,447	-				-0.9
3,800,447	-				-0.7
3,800,447	-				-0.4
3,800,451	+				-2.1
3,800,452	-				-1.0
3,800,501	+				-0.1
3,800,502	-				+0.2
3,800,502	-				+0.1
3,800,850	+		RR42_RS17560	0.89	-1.7
3,800,850	+		RR42_RS17560	0.89	-2.5
3,800,850	+		RR42_RS17560	0.89	-1.4
3,800,851	-		RR42_RS17560	0.89	-2.5
3,800,896	-				-0.2
3,800,954	+				+0.2
3,800,980	+				+0.8
3,800,980	+				+0.1
3,800,980	+				+0.2
3,800,980	+				+1.1
3,800,980	+				+0.8
3,800,981	-				+0.1
3,800,981	-				-0.9
3,800,981	-				-0.5
3,800,981	-				+0.1
3,801,001	+				+0.9
3,801,001	+				+0.9
3,801,001	+				+3.7
3,801,001	+				-0.5
3,801,001	+				+0.8
3,801,002	-				-1.9
3,801,002	-				-0.2
3,801,171	+		RR42_RS17565	0.20	+4.1
3,801,171	+		RR42_RS17565	0.20	+3.8
3,801,171	+				+3.6
3,801,171	+		RR42_RS17565	0.20	+3.8
3,801,171	+		RR42_RS17565	0.20	+3.4
3,801,171	+		RR42_RS17565	0.20	+3.4
3,801,172	-		RR42_RS17565	0.21	+3.4
3,801,172	-		RR42_RS17565	0.21	+3.5
3,801,172	-		RR42_RS17565	0.21	+1.0
3,801,172	-		RR42_RS17565	0.21	+3.7
3,801,172	-		RR42_RS17565	0.21	+3.3
3,801,172	-		RR42_RS17565	0.21	+2.6
3,801,172	-				+3.1
3,801,172	-		RR42_RS17565	0.21	+3.2
3,801,172	-		RR42_RS17565	0.21	+3.5