Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS16950

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
3,667,688	-				-1.6
3,667,884	-		RR42_RS16945	0.20	+0.1
3,667,998	+		RR42_RS16945	0.31	+1.3
3,667,998	+		RR42_RS16945	0.31	+0.7
3,667,998	+		RR42_RS16945	0.31	-0.0
3,667,999	-		RR42_RS16945	0.31	-1.9
3,668,000	+		RR42_RS16945	0.32	-0.6
3,668,000	+		RR42_RS16945	0.32	-0.7
3,668,000	+		RR42_RS16945	0.32	-0.2
3,668,000	+		RR42_RS16945	0.32	-0.8
3,668,001	-		RR42_RS16945	0.32	-0.2
3,668,001	-		RR42_RS16945	0.32	+1.2
3,668,001	-		RR42_RS16945	0.32	-0.7
3,668,001	-		RR42_RS16945	0.32	+1.3
3,668,001	-		RR42_RS16945	0.32	+0.8
3,668,072	+		RR42_RS16945	0.39	+0.6
3,668,072	+		RR42_RS16945	0.39	+0.5
3,668,073	-		RR42_RS16945	0.39	-1.2
3,668,289	-		RR42_RS16945	0.61	-0.1
3,668,578	+				+2.6
3,668,578	+				-0.7
3,668,578	+				+0.2
3,668,578	+				-1.4
3,668,583	+				-0.2
3,668,583	+				+1.0
3,668,583	+				-0.4
3,668,583	+				+0.6
3,668,627	-				+0.3
3,668,670	+				+0.6
3,668,670	+				-1.1
3,668,670	+				-0.9
3,668,671	-				-1.4
3,668,671	-				-0.1
3,668,676	+				-0.4
3,668,676	+				-0.6
3,668,676	+				-0.1
3,668,676	+				-2.0
3,668,676	+				-0.7
3,668,677	-				+1.0
3,668,679	+				-2.0
3,668,679	+				+0.6
3,668,680	-				-0.7
3,668,687	-				-2.5
3,668,694	+				-0.3
3,668,748	+				-0.7
3,668,782	+				-1.3
3,669,089	-		RR42_RS16950	0.38	-1.9
3,669,089	-		RR42_RS16950	0.38	-1.0
3,669,127	+		RR42_RS16950	0.42	-0.0
3,669,183	+		RR42_RS16950	0.47	-3.1
3,669,208	+		RR42_RS16950	0.50	-2.8
3,669,208	+		RR42_RS16950	0.50	-0.0
3,669,209	-		RR42_RS16950	0.50	-1.0
3,669,439	+		RR42_RS16950	0.71	-0.7
3,669,440	-		RR42_RS16950	0.71	+0.4
3,669,602	-		RR42_RS16950	0.87	-1.5
3,669,602	-		RR42_RS16950	0.87	-1.0
3,669,824	+				-1.4
3,669,824	+				-0.3
3,669,824	+				-0.2
3,669,824	+				+0.3
3,669,824	+				-0.3
3,669,824	+				-0.3
3,669,824	+				-0.1
3,669,824	+				+0.3
3,669,824	+				-1.8
3,669,824	+				-1.4
3,669,825	-				-1.1
3,669,826	+				-1.2
3,669,826	+				-1.3
3,669,843	+				+0.3
3,669,843	+				-0.1
3,669,867	+				+0.4
3,669,867	+				-1.7
3,669,872	+				+0.3
3,669,872	+				+0.9
3,669,872	+				+0.1