Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS16730

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
3,619,617	+		RR42_RS16725	0.31	+0.2
3,619,620	+		RR42_RS16725	0.31	-0.3
3,619,620	+		RR42_RS16725	0.31	-0.2
3,619,620	+		RR42_RS16725	0.31	+0.7
3,619,621	-		RR42_RS16725	0.31	-0.4
3,619,827	+		RR42_RS16725	0.54	-2.6
3,619,827	+		RR42_RS16725	0.54	-0.6
3,619,828	-		RR42_RS16725	0.54	+0.5
3,619,890	-		RR42_RS16725	0.61	-0.5
3,619,933	-		RR42_RS16725	0.66	-1.2
3,619,947	+		RR42_RS16725	0.68	-0.1
3,619,948	-		RR42_RS16725	0.68	+0.6
3,619,948	-		RR42_RS16725	0.68	-1.0
3,619,990	-		RR42_RS16725	0.72	-0.3
3,619,990	-		RR42_RS16725	0.72	+0.3
3,620,023	-		RR42_RS16725	0.76	+2.0
3,620,136	+		RR42_RS16725	0.89	-0.2
3,620,136	+		RR42_RS16725	0.89	+2.6
3,620,137	-		RR42_RS16725	0.89	+0.3
3,620,264	-				-0.6
3,620,383	+				+2.6
3,620,384	-				+0.2
3,620,434	+		RR42_RS16730	0.14	-0.4
3,620,435	-		RR42_RS16730	0.14	-0.5
3,620,435	-		RR42_RS16730	0.14	-0.9
3,620,435	-		RR42_RS16730	0.14	+0.5
3,620,531	+		RR42_RS16730	0.23	+0.3
3,620,531	+		RR42_RS16730	0.23	+1.0
3,620,532	-		RR42_RS16730	0.23	-0.6
3,620,677	+		RR42_RS16730	0.37	+0.4
3,620,677	+		RR42_RS16730	0.37	-0.6
3,620,677	+		RR42_RS16730	0.37	-0.8
3,620,678	-		RR42_RS16730	0.37	-0.4
3,620,678	-		RR42_RS16730	0.37	-2.2
3,620,687	-		RR42_RS16730	0.38	-0.4
3,620,687	-		RR42_RS16730	0.38	-1.6
3,620,802	+		RR42_RS16730	0.49	-1.6
3,620,802	+		RR42_RS16730	0.49	-0.3
3,620,803	-		RR42_RS16730	0.49	-0.2
3,621,484	-		RR42_RS16735	0.13	+0.4
3,621,659	+		RR42_RS16735	0.34	+0.5
3,621,660	-		RR42_RS16735	0.34	+1.0
3,621,660	-		RR42_RS16735	0.34	-0.9
3,621,695	+		RR42_RS16735	0.38	-0.7
3,621,702	+		RR42_RS16735	0.39	-2.8
3,621,702	+		RR42_RS16735	0.39	+0.1
3,621,962	+		RR42_RS16735	0.71	-1.3
3,621,962	+		RR42_RS16735	0.71	-0.2
3,621,963	-		RR42_RS16735	0.71	+1.2
3,621,963	-		RR42_RS16735	0.71	+0.4
3,622,074	+		RR42_RS16735	0.85	+2.0
3,622,172	+				+1.6
3,622,197	-				-1.2
3,622,307	-				-1.6