Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS16140

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
3,493,238	+		RR42_RS16135	0.24	+0.1
3,493,239	-		RR42_RS16135	0.24	+1.0
3,493,239	-		RR42_RS16135	0.24	-0.3
3,493,411	+		RR42_RS16135	0.41	+0.6
3,493,411	+		RR42_RS16135	0.41	+1.6
3,493,412	-		RR42_RS16135	0.41	+1.7
3,493,735	+		RR42_RS16135	0.73	-0.2
3,493,735	+		RR42_RS16135	0.73	+0.4
3,493,736	-		RR42_RS16135	0.73	-1.0
3,493,736	-		RR42_RS16135	0.73	+0.0
3,494,089	+				+0.9
3,494,090	-				-1.8
3,494,148	-				+1.3
3,494,309	+		RR42_RS16140	0.15	+1.4
3,494,435	-		RR42_RS16140	0.21	-0.5
3,494,527	+		RR42_RS16140	0.26	-0.1
3,494,527	+		RR42_RS16140	0.26	+0.6
3,494,527	+		RR42_RS16140	0.26	-0.3
3,494,528	-		RR42_RS16140	0.26	-0.3
3,494,528	-		RR42_RS16140	0.26	+0.5
3,494,594	-		RR42_RS16140	0.30	-2.7
3,494,594	-		RR42_RS16140	0.30	+0.1
3,494,596	+		RR42_RS16140	0.30	+0.2
3,494,596	+		RR42_RS16140	0.30	-0.3
3,494,597	-		RR42_RS16140	0.30	+1.1
3,494,597	-		RR42_RS16140	0.30	+1.6
3,494,671	+		RR42_RS16140	0.34	+3.6
3,494,690	-		RR42_RS16140	0.35	-0.3
3,494,771	-		RR42_RS16140	0.39	-1.7
3,494,812	+		RR42_RS16140	0.41	-0.2
3,494,812	+		RR42_RS16140	0.41	+0.0
3,494,843	-		RR42_RS16140	0.42	+0.8
3,494,902	+		RR42_RS16140	0.45	-0.1
3,495,008	+		RR42_RS16140	0.51	-0.4
3,495,034	-		RR42_RS16140	0.52	+4.3
3,495,040	+		RR42_RS16140	0.53	+1.0
3,495,041	-		RR42_RS16140	0.53	-0.5
3,495,041	-		RR42_RS16140	0.53	+0.4
3,495,071	+		RR42_RS16140	0.54	+2.3
3,495,095	-		RR42_RS16140	0.55	-0.7
3,495,095	-		RR42_RS16140	0.55	+1.8
3,495,115	+		RR42_RS16140	0.56	-0.6
3,495,191	-		RR42_RS16140	0.60	-0.5
3,495,276	-		RR42_RS16140	0.65	+0.3
3,495,343	+		RR42_RS16140	0.68	+1.6
3,495,465	-		RR42_RS16140	0.74	-0.1
3,495,701	+		RR42_RS16140	0.87	-0.2
3,495,701	+		RR42_RS16140	0.87	-0.9
3,495,702	-		RR42_RS16140	0.87	+0.9
3,495,943	+				+0.3
3,495,943	+				-1.7
3,495,944	-				-1.0
3,496,176	+				-0.9
3,496,275	+				-0.6
3,496,276	-				+0.3
3,496,302	+				-0.7
3,496,367	+				+0.9
3,496,367	+				+0.6
3,496,368	-				-0.4
3,496,495	+				+0.9
3,496,511	+				-0.4
3,496,834	+				-2.0
3,496,834	+				+0.4
3,496,834	+				-1.5
3,496,834	+				+1.6
3,496,835	-				+0.6
3,496,835	-				+1.0
3,496,835	-				-0.6