Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15580

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
3,363,858	+				+0.6
3,363,891	+				-0.1
3,363,892	-				-0.8
3,363,896	-				-0.0
3,363,926	-				+0.2
3,363,926	-				-0.1
3,363,926	-				-0.1
3,364,154	-		RR42_RS15580	0.17	-0.4
3,364,154	-		RR42_RS15580	0.17	+0.3
3,364,204	+		RR42_RS15580	0.21	-0.7
3,364,204	+		RR42_RS15580	0.21	+1.0
3,364,204	+		RR42_RS15580	0.21	+0.6
3,364,204	+		RR42_RS15580	0.21	+0.6
3,364,204	+		RR42_RS15580	0.21	+0.2
3,364,205	-		RR42_RS15580	0.21	-1.2
3,364,216	+		RR42_RS15580	0.22	-1.1
3,364,216	+		RR42_RS15580	0.22	+1.3
3,364,217	-		RR42_RS15580	0.22	+1.6
3,364,579	+		RR42_RS15580	0.53	+0.9
3,364,579	+		RR42_RS15580	0.53	+1.1
3,364,579	+		RR42_RS15580	0.53	+1.4
3,364,580	-		RR42_RS15580	0.53	+0.4
3,364,580	-		RR42_RS15580	0.53	-1.2
3,364,580	-		RR42_RS15580	0.53	-0.7
3,364,594	+		RR42_RS15580	0.54	-1.4
3,364,594	+		RR42_RS15580	0.54	-1.1
3,364,595	-		RR42_RS15580	0.54	-1.3
3,364,595	-		RR42_RS15580	0.54	+2.6
3,364,670	+		RR42_RS15580	0.61	-0.0
3,364,671	+		RR42_RS15580	0.61	+1.2
3,364,671	+		RR42_RS15580	0.61	-0.8
3,364,671	+		RR42_RS15580	0.61	-0.2
3,364,671	+		RR42_RS15580	0.61	+0.3
3,364,672	-		RR42_RS15580	0.61	+1.5
3,364,718	+		RR42_RS15580	0.65	-1.1
3,364,719	-		RR42_RS15580	0.65	-0.5
3,364,819	+		RR42_RS15580	0.73	-0.5
3,364,819	+		RR42_RS15580	0.73	+0.3
3,364,819	+		RR42_RS15580	0.73	-0.1
3,364,820	-		RR42_RS15580	0.73	+0.1
3,364,820	-		RR42_RS15580	0.73	+0.5
3,364,921	+		RR42_RS15580	0.82	-0.3
3,364,921	+		RR42_RS15580	0.82	+0.2
3,364,921	+		RR42_RS15580	0.82	-1.4
3,364,921	+		RR42_RS15580	0.82	-0.3
3,364,921	+		RR42_RS15580	0.82	-1.2
3,364,921	+		RR42_RS15580	0.82	+0.8
3,364,921	+		RR42_RS15580	0.82	-0.1
3,364,921	+		RR42_RS15580	0.82	-1.0
3,364,921	+		RR42_RS15580	0.82	+1.0
3,364,921	+		RR42_RS15580	0.82	-0.9
3,364,921	+		RR42_RS15580	0.82	+0.3
3,364,922	-		RR42_RS15580	0.82	-0.1
3,364,922	-		RR42_RS15580	0.82	+0.6
3,364,922	-		RR42_RS15580	0.82	+0.5
3,364,922	-		RR42_RS15580	0.82	+1.8
3,364,922	-		RR42_RS15580	0.82	-0.2
3,364,922	-		RR42_RS15580	0.82	+0.4
3,364,922	-		RR42_RS15580	0.82	-0.7
3,364,922	-		RR42_RS15580	0.82	-2.0
3,364,922	-		RR42_RS15580	0.82	-0.5
3,364,922	-		RR42_RS15580	0.82	+1.2
3,364,927	+		RR42_RS15580	0.82	-0.8
3,364,927	+		RR42_RS15580	0.82	-0.8
3,365,042	-				-0.1
3,365,056	+				+0.1
3,365,057	-				+0.9
3,365,072	-				+0.4
3,365,204	+				-0.0
3,365,440	+		RR42_RS15585	0.21	-0.5
3,365,440	+		RR42_RS15585	0.21	-1.0
3,365,441	-		RR42_RS15585	0.21	-1.1
3,365,441	-		RR42_RS15585	0.21	-0.7
3,365,441	-		RR42_RS15585	0.21	-1.5
3,365,443	+		RR42_RS15585	0.21	-0.2
3,365,443	+		RR42_RS15585	0.21	-0.3
3,365,444	-		RR42_RS15585	0.21	-0.0
3,365,444	-		RR42_RS15585	0.21	+0.1
3,365,481	-		RR42_RS15585	0.24	-0.4
3,365,560	+		RR42_RS15585	0.32	-1.0
3,365,560	+		RR42_RS15585	0.32	+1.0
3,365,560	+		RR42_RS15585	0.32	-1.4
3,365,560	+		RR42_RS15585	0.32	-0.7
3,365,561	-		RR42_RS15585	0.32	-1.4
3,365,561	-		RR42_RS15585	0.32	-0.4
3,365,705	-		RR42_RS15585	0.45	-0.9
3,365,705	-		RR42_RS15585	0.45	-1.8
3,365,705	-		RR42_RS15585	0.45	-2.1
3,365,750	-		RR42_RS15585	0.50	-0.3
3,365,750	-		RR42_RS15585	0.50	-1.4
3,365,750	-		RR42_RS15585	0.50	-1.1
3,365,764	+		RR42_RS15585	0.51	-0.8
3,365,764	+		RR42_RS15585	0.51	+0.9
3,365,764	+		RR42_RS15585	0.51	+0.1
3,365,765	-		RR42_RS15585	0.51	-0.0
3,365,997	+		RR42_RS15585	0.73	-0.9
3,365,998	-		RR42_RS15585	0.73	+0.2
3,366,059	+		RR42_RS15585	0.79	-0.8
3,366,099	+		RR42_RS15585	0.82	-1.3
3,366,099	+		RR42_RS15585	0.82	-1.7
3,366,100	-		RR42_RS15585	0.82	-1.7
3,366,131	-		RR42_RS15585	0.85	-2.1
3,366,131	-		RR42_RS15585	0.85	+1.0
3,366,131	-		RR42_RS15585	0.85	-0.9