Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15245

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
3,299,922	+		RR42_RS15235	0.89	-1.9
3,300,062	-				-0.3
3,300,252	+		RR42_RS15240	0.38	-1.6
3,300,252	+		RR42_RS15240	0.38	-0.6
3,300,253	-		RR42_RS15240	0.39	+0.2
3,300,253	-		RR42_RS15240	0.39	-0.1
3,300,253	-		RR42_RS15240	0.39	-0.3
3,300,253	-		RR42_RS15240	0.39	-0.6
3,300,253	-		RR42_RS15240	0.39	-0.0
3,300,412	-				-0.2
3,300,412	-				-0.0
3,300,412	-				+2.1
3,300,414	+				+0.3
3,300,426	+				-0.7
3,300,427	-				-0.2
3,300,838	+		RR42_RS15245	0.74	-1.3
3,300,850	-		RR42_RS15245	0.77	-0.8
3,300,890	+		RR42_RS15245	0.87	+1.8
3,301,213	+				+0.6
3,301,213	+				+0.5
3,301,214	-				-1.1
3,301,214	-				+0.8
3,301,271	+				-1.4
3,301,271	+				-0.4
3,301,271	+				+1.2
3,301,271	+				-0.6
3,301,284	+				+0.6
3,301,285	-				-0.2
3,301,285	-				-1.3
3,301,285	-				+0.2
3,301,285	-				-0.1
3,301,285	-				-0.8
3,301,285	-				-1.4
3,301,324	-		RR42_RS15250	0.11	-0.4
3,301,326	+		RR42_RS15250	0.11	-0.0
3,301,327	-		RR42_RS15250	0.12	+0.7
3,301,327	-		RR42_RS15250	0.12	+0.2
3,301,347	-		RR42_RS15250	0.15	-0.2
3,301,347	-		RR42_RS15250	0.15	+0.1
3,301,347	-		RR42_RS15250	0.15	-0.7
3,301,347	-		RR42_RS15250	0.15	-0.4
3,301,581	+		RR42_RS15250	0.58	-1.0
3,301,582	-		RR42_RS15250	0.58	-0.9
3,301,582	-		RR42_RS15250	0.58	-0.9
3,301,582	-		RR42_RS15250	0.58	-0.9
3,301,582	-		RR42_RS15250	0.58	-0.9
3,301,656	+		RR42_RS15250	0.72	+1.0
3,301,656	+		RR42_RS15250	0.72	-0.8
3,301,657	-		RR42_RS15250	0.72	-0.8
3,301,657	-		RR42_RS15250	0.72	+1.8
3,301,657	-		RR42_RS15250	0.72	-0.1
3,301,887	+				-0.9
3,301,887	+				-0.3
3,301,913	+				+1.6
3,301,913	+				-0.4
3,301,913	+				+0.1
3,301,914	-				+0.9
3,301,914	-				-0.0
3,301,914	-				-0.3