Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS13470

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
2,905,162	+		RR42_RS13465	0.42	+0.3
2,905,487	-		RR42_RS13465	0.76	+1.2
2,905,487	-		RR42_RS13465	0.76	+0.2
2,905,508	-		RR42_RS13465	0.78	+0.1
2,905,698	+				+0.4
2,905,709	+				+0.4
2,905,710	-				-0.3
2,905,726	+				+0.7
2,905,838	-				-0.2
2,905,838	-				+0.9
2,905,849	+				+1.2
2,905,850	-				+0.1
2,905,855	+				+0.2
2,905,855	+				+0.9
2,905,856	-				+4.1
2,905,856	-				+0.2
2,905,856	-				-0.0
2,905,856	-				+0.5
2,905,856	-				-0.1
2,905,861	+				+0.6
2,905,861	+				-1.8
2,905,861	+				+0.5
2,905,862	-				-0.4
2,905,868	-				+0.7
2,905,873	+				+0.9
2,905,973	-				-0.2
2,905,973	-				-0.6
2,906,052	+				-0.2
2,906,052	+				+1.7
2,906,056	+				-0.1
2,906,092	+		RR42_RS13470	0.12	-1.2
2,906,154	+		RR42_RS13470	0.18	+0.2
2,906,224	+		RR42_RS13470	0.25	-0.0
2,906,224	+		RR42_RS13470	0.25	+1.0
2,906,224	+		RR42_RS13470	0.25	+1.0
2,906,224	+		RR42_RS13470	0.25	+0.3
2,906,224	+		RR42_RS13470	0.25	+1.1
2,906,225	-		RR42_RS13470	0.25	-1.2
2,906,494	+		RR42_RS13470	0.51	+0.2
2,906,494	+		RR42_RS13470	0.51	+0.5
2,906,494	+		RR42_RS13470	0.51	+1.4
2,906,494	+		RR42_RS13470	0.51	+0.7
2,906,494	+		RR42_RS13470	0.51	+1.0
2,906,626	+		RR42_RS13470	0.64	-0.2
2,906,626	+		RR42_RS13470	0.64	+0.7
2,906,627	-		RR42_RS13470	0.64	+0.6
2,906,627	-		RR42_RS13470	0.64	-1.1
2,906,869	+		RR42_RS13470	0.87	+0.2
2,906,869	+		RR42_RS13470	0.87	+2.0
2,906,999	+				-0.1
2,906,999	+				+0.4
2,906,999	+				+0.3
2,906,999	+				+0.5
2,906,999	+				-0.3
2,906,999	+				+0.9
2,906,999	+				-0.9
2,906,999	+				+1.3
2,907,000	-				+0.2
2,907,256	+				-1.4