Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS13360

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
2,881,145	-				-0.3
2,881,159	-				+0.5
2,881,160	+				+1.2
2,881,160	+				-0.4
2,881,160	+				-1.2
2,881,161	-				+0.1
2,881,161	-				-1.7
2,881,224	+				-0.9
2,881,224	+				+1.1
2,881,225	-				-1.2
2,881,225	-				-0.5
2,881,225	-				-0.5
2,881,225	-				-1.4
2,881,263	+				-0.6
2,881,264	-				-1.0
2,881,264	-				-2.3
2,881,267	+				+1.8
2,881,621	+		RR42_RS13360	0.29	-0.9
2,881,621	+		RR42_RS13360	0.29	-3.3
2,881,753	+		RR42_RS13360	0.43	-1.5
2,881,753	+		RR42_RS13360	0.43	-0.1
2,881,753	+		RR42_RS13360	0.43	-2.0
2,881,753	+		RR42_RS13360	0.43	-1.3
2,881,753	+		RR42_RS13360	0.43	-0.2
2,881,754	-		RR42_RS13360	0.43	-1.5
2,881,754	-		RR42_RS13360	0.43	-1.3
2,881,754	-		RR42_RS13360	0.43	-2.4
2,881,890	+		RR42_RS13360	0.58	-2.5
2,881,936	+		RR42_RS13360	0.62	-3.0
2,881,936	+		RR42_RS13360	0.62	-2.4
2,881,936	+		RR42_RS13360	0.62	-1.1
2,881,936	+		RR42_RS13360	0.62	-0.9
2,881,937	-		RR42_RS13360	0.63	+0.1
2,881,937	-		RR42_RS13360	0.63	-0.2
2,881,937	-		RR42_RS13360	0.63	-1.9
2,882,017	-		RR42_RS13360	0.71	-2.1
2,882,064	-		RR42_RS13360	0.76	-1.5
2,882,435	+				+0.7
2,882,436	-				+0.3
2,882,436	-				-0.4
2,882,501	-		RR42_RS13365	0.19	-1.0
2,882,591	-		RR42_RS13365	0.32	+0.5
2,882,741	-		RR42_RS13365	0.54	-2.5
2,882,992	-				+2.5
2,882,992	-				+1.1
2,883,183	-				-0.0
2,883,183	-				+0.1
2,883,210	+				-1.5
2,883,210	+				-1.2
2,883,227	+				-1.9
2,883,228	-				-2.0
2,883,229	+				+0.5
2,883,229	+				+0.8
2,883,229	+				-1.2
2,883,229	+				-0.7
2,883,230	-				+0.3
2,883,230	-				-0.3
2,883,230	-				-1.9