Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12570

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
2,701,104	+				-0.1
2,701,105	-				+0.1
2,701,105	-				-1.7
2,701,108	+				+0.2
2,701,108	+				-0.5
2,701,109	-				-0.1
2,701,109	-				+1.1
2,701,109	-				+0.5
2,701,207	+				-0.1
2,701,239	-				-0.3
2,701,239	-				+1.4
2,701,239	-				-0.5
2,701,275	+				-0.0
2,701,276	-				+0.3
2,701,313	+				-0.7
2,701,528	+		RR42_RS12565	0.26	+0.2
2,701,528	+		RR42_RS12565	0.26	-0.2
2,701,529	-		RR42_RS12565	0.26	-1.2
2,701,529	-		RR42_RS12565	0.26	+0.1
2,701,554	+		RR42_RS12565	0.32	+1.3
2,701,554	+		RR42_RS12565	0.32	+0.3
2,701,554	+		RR42_RS12565	0.32	-0.3
2,701,554	+		RR42_RS12565	0.32	+0.0
2,701,555	-		RR42_RS12565	0.32	-1.0
2,701,555	-		RR42_RS12565	0.32	+0.1
2,701,555	-		RR42_RS12565	0.32	+0.1
2,701,555	-		RR42_RS12565	0.32	-0.2
2,701,555	-		RR42_RS12565	0.32	+0.7
2,701,758	+		RR42_RS12565	0.80	-0.3
2,701,758	+		RR42_RS12565	0.80	-0.2
2,701,776	+		RR42_RS12565	0.84	-0.4
2,701,777	-		RR42_RS12565	0.85	-0.6
2,701,777	-		RR42_RS12565	0.85	+0.6
2,701,777	-		RR42_RS12565	0.85	-0.5
2,701,777	-		RR42_RS12565	0.85	-0.3
2,701,778	+		RR42_RS12565	0.85	-0.6
2,701,779	-		RR42_RS12565	0.85	-0.3
2,701,779	-		RR42_RS12565	0.85	-0.2
2,701,779	-		RR42_RS12565	0.85	-1.1
2,701,839	+				+0.5
2,701,840	-				+1.9
2,702,052	+		RR42_RS12570	0.20	-1.0
2,702,052	+		RR42_RS12570	0.20	-0.6
2,702,053	-		RR42_RS12570	0.20	+0.4
2,702,055	-		RR42_RS12570	0.20	+1.0
2,702,152	-		RR42_RS12570	0.35	-0.2
2,702,168	+		RR42_RS12570	0.37	-0.3
2,702,169	-		RR42_RS12570	0.37	-1.4
2,702,169	-		RR42_RS12570	0.37	+1.2
2,702,169	-		RR42_RS12570	0.37	-1.0
2,702,324	+		RR42_RS12570	0.60	-0.3
2,702,358	+		RR42_RS12570	0.65	-1.4
2,702,358	+		RR42_RS12570	0.65	-1.3
2,702,358	+		RR42_RS12570	0.65	-0.8
2,702,358	+		RR42_RS12570	0.65	+0.7
2,702,358	+		RR42_RS12570	0.65	+0.5
2,702,358	+		RR42_RS12570	0.65	+0.7
2,702,359	-		RR42_RS12570	0.65	+0.2
2,702,359	-		RR42_RS12570	0.65	-0.9
2,702,693	+				-0.1
2,702,694	-				+1.8
2,702,700	+				+1.5
2,702,701	-				+0.0
2,702,850	+		RR42_RS12575	0.16	+0.4
2,702,851	-		RR42_RS12575	0.16	-0.1
2,703,017	+		RR42_RS12575	0.32	-1.2
2,703,017	+		RR42_RS12575	0.32	-1.4
2,703,017	+		RR42_RS12575	0.32	-0.2
2,703,018	-		RR42_RS12575	0.32	+0.0
2,703,144	-		RR42_RS12575	0.45	-0.8
2,703,144	-		RR42_RS12575	0.45	+0.3
2,703,280	-		RR42_RS12575	0.58	+0.5
2,703,389	-		RR42_RS12575	0.69	-0.1
2,703,395	+		RR42_RS12575	0.70	+0.2
2,703,395	+		RR42_RS12575	0.70	-0.5
2,703,396	-		RR42_RS12575	0.70	+0.2
2,703,398	+		RR42_RS12575	0.70	-0.2
2,703,399	-		RR42_RS12575	0.70	+0.9
2,703,453	-		RR42_RS12575	0.75	-0.8
2,703,466	-		RR42_RS12575	0.77	-1.7
2,703,466	-		RR42_RS12575	0.77	+0.3