Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12485

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
2,684,746	+		RR42_RS12480	0.10	+0.9
2,684,746	+		RR42_RS12480	0.10	-0.5
2,684,746	+		RR42_RS12480	0.10	+0.4
2,684,747	-		RR42_RS12480	0.10	-3.0
2,684,825	+		RR42_RS12480	0.18	+0.6
2,684,826	-		RR42_RS12480	0.18	-0.1
2,684,864	+		RR42_RS12480	0.22	-0.1
2,685,050	+		RR42_RS12480	0.40	-0.2
2,685,088	+		RR42_RS12480	0.43	-0.1
2,685,089	-		RR42_RS12480	0.44	-1.6
2,685,089	-		RR42_RS12480	0.44	-0.3
2,685,089	-		RR42_RS12480	0.44	-0.7
2,685,244	+		RR42_RS12480	0.59	+1.2
2,685,400	+		RR42_RS12480	0.74	-1.3
2,685,560	-		RR42_RS12480	0.89	-0.3
2,685,663	-				+0.5
2,685,663	-				+0.8
2,685,690	-				+2.2
2,685,697	+				+2.5
2,685,697	+				+0.7
2,685,698	-				-0.7
2,685,698	-				+0.9
2,685,911	+		RR42_RS12485	0.22	-0.1
2,685,912	-		RR42_RS12485	0.23	+0.2
2,686,218	+		RR42_RS12485	0.64	+0.6
2,686,537	+				-1.0
2,686,537	+				-0.6
2,686,989	+		RR42_RS12490	0.64	+0.9
2,686,989	+		RR42_RS12490	0.64	+0.3
2,686,990	-		RR42_RS12490	0.64	+0.3
2,687,134	+		RR42_RS12490	0.82	+0.7
2,687,135	-		RR42_RS12490	0.82	-0.9
2,687,135	-		RR42_RS12490	0.82	-1.1
2,687,135	-		RR42_RS12490	0.82	-0.1
2,687,301	-				+1.5
2,687,301	-				-0.8
2,687,301	-				-1.4
2,687,433	+				-0.5
2,687,433	+				+0.1
2,687,434	-				-0.1