Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12215

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
2,625,676	-		RR42_RS12205	0.47	-0.1
2,625,676	-		RR42_RS12205	0.47	-0.4
2,625,787	+		RR42_RS12205	0.58	+0.5
2,625,787	+		RR42_RS12205	0.58	-0.5
2,625,787	+		RR42_RS12205	0.58	-1.6
2,625,788	-		RR42_RS12205	0.58	-0.8
2,625,788	-		RR42_RS12205	0.58	+0.1
2,625,788	-		RR42_RS12205	0.58	-0.9
2,625,788	-		RR42_RS12205	0.58	+0.8
2,625,788	-		RR42_RS12205	0.58	-0.8
2,625,788	-		RR42_RS12205	0.58	-0.4
2,625,789	+		RR42_RS12205	0.58	-0.8
2,625,790	-		RR42_RS12205	0.58	-0.5
2,625,790	-		RR42_RS12205	0.58	-2.0
2,625,790	-		RR42_RS12205	0.58	-0.1
2,625,790	-		RR42_RS12205	0.58	+2.5
2,626,002	+		RR42_RS12205	0.80	-0.0
2,626,002	+		RR42_RS12205	0.80	+0.6
2,626,002	+		RR42_RS12205	0.80	-0.5
2,626,003	-		RR42_RS12205	0.81	+0.2
2,626,005	+		RR42_RS12205	0.81	-0.2
2,626,006	-		RR42_RS12205	0.81	+0.8
2,626,006	-		RR42_RS12205	0.81	-0.6
2,626,215	+				-0.7
2,626,215	+				+0.6
2,626,216	-				+1.1
2,626,458	+		RR42_RS12210	0.46	+0.4
2,626,459	-		RR42_RS12210	0.47	-0.6
2,626,531	+		RR42_RS12210	0.64	-0.8
2,626,531	+		RR42_RS12210	0.64	+0.4
2,626,546	+		RR42_RS12210	0.68	+0.4
2,626,547	-		RR42_RS12210	0.68	-0.6
2,626,547	-		RR42_RS12210	0.68	+0.1
2,626,725	+				-1.2
2,626,725	+				-1.1
2,626,725	+				-1.4
2,626,725	+				-0.3
2,626,725	+				-0.5
2,626,726	-		RR42_RS12215	0.10	+0.2
2,627,094	-		RR42_RS12215	0.84	+0.8
2,627,094	-		RR42_RS12215	0.84	+0.0
2,627,161	+				+0.6
2,627,161	+				+0.3
2,627,161	+				+1.9
2,627,451	+		RR42_RS12220	0.17	-1.6
2,627,574	-		RR42_RS12220	0.26	+0.3
2,627,701	+		RR42_RS12220	0.36	-1.1
2,627,701	+		RR42_RS12220	0.36	-0.9
2,627,701	+		RR42_RS12220	0.36	-1.4
2,627,701	+		RR42_RS12220	0.36	-0.6
2,627,701	+		RR42_RS12220	0.36	-0.5
2,627,701	+		RR42_RS12220	0.36	+0.2
2,627,701	+		RR42_RS12220	0.36	+0.4
2,627,701	+		RR42_RS12220	0.36	-0.2
2,627,702	-		RR42_RS12220	0.36	-0.1
2,627,702	-		RR42_RS12220	0.36	+0.9
2,627,702	-		RR42_RS12220	0.36	-0.5
2,627,702	-		RR42_RS12220	0.36	+0.4
2,627,702	-		RR42_RS12220	0.36	-0.9
2,627,702	-		RR42_RS12220	0.36	+0.4
2,627,702	-		RR42_RS12220	0.36	+0.7
2,627,702	-		RR42_RS12220	0.36	-1.7
2,627,702	-		RR42_RS12220	0.36	-0.8
2,627,702	-		RR42_RS12220	0.36	-1.1
2,627,702	-		RR42_RS12220	0.36	-1.5
2,627,702	-		RR42_RS12220	0.36	-0.3
2,627,702	-		RR42_RS12220	0.36	-0.1
2,627,703	+		RR42_RS12220	0.36	-1.3
2,627,704	-		RR42_RS12220	0.37	-0.6
2,627,704	-		RR42_RS12220	0.37	-0.2
2,627,712	+		RR42_RS12220	0.37	-0.9
2,627,713	-		RR42_RS12220	0.37	+0.4
2,627,745	+		RR42_RS12220	0.40	+0.5
2,627,745	+		RR42_RS12220	0.40	-0.5