Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12085

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
2,588,461	+				-0.2
2,588,520	+				+0.2
2,588,520	+				+0.8
2,588,521	-				-0.3
2,588,521	-				-1.0
2,588,534	-				-1.1
2,588,536	+				-0.8
2,588,536	+				-1.2
2,588,536	+				-1.6
2,588,536	+				-0.3
2,588,536	+				+1.5
2,588,537	-				-0.5
2,588,537	-				+0.0
2,588,537	-				-0.2
2,588,537	-				+0.5
2,588,537	-				+0.2
2,588,537	-				+0.3
2,588,537	-				-1.1
2,588,649	+				-0.4
2,588,649	+				+0.3
2,588,649	+				+1.0
2,588,649	+				+1.2
2,588,649	+				-1.8
2,588,650	-				-0.2
2,588,657	+		RR42_RS12080	0.10	-1.0
2,588,658	-		RR42_RS12080	0.10	+0.2
2,588,787	+		RR42_RS12080	0.28	-1.0
2,588,787	+		RR42_RS12080	0.28	+0.0
2,589,216	+		RR42_RS12080	0.88	+0.1
2,589,328	+				+0.1
2,589,328	+				-1.0
2,589,365	+				-1.5
2,589,365	+				+0.9
2,589,366	-				+1.5
2,589,366	-				-0.4
2,589,366	-				-0.1
2,589,366	-				+0.2
2,589,366	-				+0.5
2,589,471	+				-0.5
2,589,472	-				-1.6
2,589,509	-		RR42_RS12085	0.12	+1.1
2,589,593	-		RR42_RS12085	0.31	-1.2
2,589,593	-		RR42_RS12085	0.31	-1.3
2,589,593	-		RR42_RS12085	0.31	+1.4
2,589,903	+				-0.2
2,589,941	-				-0.0
2,589,941	-				+0.7
2,589,979	+				+2.5
2,590,024	+				+0.0
2,590,025	-				-0.1
2,590,025	-				-1.6
2,590,173	+				+1.9
2,590,234	+		RR42_RS12090	0.14	+0.9
2,590,823	-		RR42_RS12090	0.64	-0.4