Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11925

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
2,554,979	-				-0.8
2,555,021	+				-1.3
2,555,021	+				+0.2
2,555,103	+		RR42_RS11920	0.11	+0.5
2,555,103	+		RR42_RS11920	0.11	+0.1
2,555,103	+		RR42_RS11920	0.11	+0.6
2,555,104	-		RR42_RS11920	0.11	+0.7
2,555,104	-		RR42_RS11920	0.11	-1.2
2,555,169	+		RR42_RS11920	0.19	-0.1
2,555,170	-		RR42_RS11920	0.19	-0.8
2,555,170	-		RR42_RS11920	0.19	-0.5
2,555,173	-		RR42_RS11920	0.20	+1.1
2,555,173	-		RR42_RS11920	0.20	-0.5
2,555,256	+		RR42_RS11920	0.30	-2.1
2,555,256	+		RR42_RS11920	0.30	+0.3
2,555,256	+		RR42_RS11920	0.30	-0.1
2,555,257	-		RR42_RS11920	0.30	-1.0
2,555,257	-		RR42_RS11920	0.30	-0.8
2,555,298	+		RR42_RS11920	0.35	-0.4
2,555,327	+		RR42_RS11920	0.39	+0.3
2,555,327	+		RR42_RS11920	0.39	-0.1
2,555,328	-		RR42_RS11920	0.39	-1.2
2,555,328	-		RR42_RS11920	0.39	+0.6
2,555,328	-		RR42_RS11920	0.39	+0.2
2,555,413	-		RR42_RS11920	0.49	-0.6
2,555,494	-		RR42_RS11920	0.59	-0.2
2,555,506	-		RR42_RS11920	0.60	+0.1
2,555,511	+		RR42_RS11920	0.61	+0.4
2,555,826	+				+0.1
2,555,846	+				-0.6
2,555,846	+				-0.1
2,555,847	-				-0.9
2,555,847	-				+0.3
2,555,847	-				+0.1
2,555,847	-				-1.4
2,556,077	+		RR42_RS11925	0.24	-0.9
2,556,100	+		RR42_RS11925	0.26	-0.2
2,556,101	-		RR42_RS11925	0.26	+0.0
2,556,225	-		RR42_RS11925	0.39	-0.3
2,556,225	-		RR42_RS11925	0.39	+0.2
2,556,413	-		RR42_RS11925	0.58	-0.8
2,556,436	+		RR42_RS11925	0.60	+1.1
2,556,492	-		RR42_RS11925	0.66	-0.2
2,556,492	-		RR42_RS11925	0.66	+0.3
2,556,538	+		RR42_RS11925	0.71	+1.4
2,556,539	-		RR42_RS11925	0.71	+1.0
2,556,990	+				+0.5
2,556,992	+				+0.2
2,556,992	+				-0.4
2,556,992	+				-0.3
2,557,066	+				-1.1
2,557,244	+		RR42_RS11930	0.17	+0.1
2,557,244	+		RR42_RS11930	0.17	+0.2
2,557,244	+		RR42_RS11930	0.17	-1.4
2,557,244	+		RR42_RS11930	0.17	+0.8
2,557,244	+		RR42_RS11930	0.17	-1.2
2,557,244	+		RR42_RS11930	0.17	-0.2
2,557,423	+		RR42_RS11930	0.32	+1.7
2,557,669	+		RR42_RS11930	0.52	-0.4
2,557,669	+		RR42_RS11930	0.52	-0.5