Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11635

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
2,492,937	+		RR42_RS11630	0.85	-1.0
2,492,978	+		RR42_RS11630	0.86	-1.6
2,492,979	-		RR42_RS11630	0.86	-0.6
2,493,088	+				+1.5
2,493,371	+				-0.1
2,493,371	+				-1.2
2,494,087	+		RR42_RS11635	0.89	-0.5
2,494,087	+		RR42_RS11635	0.89	+1.3
2,494,087	+		RR42_RS11635	0.89	+1.5
2,494,087	+		RR42_RS11635	0.89	-1.4
2,494,087	+		RR42_RS11635	0.89	-0.6
2,494,088	-		RR42_RS11635	0.90	+0.2
2,494,242	+				-0.8
2,494,242	+				-0.7
2,494,243	-				+1.1
2,494,325	+				+1.5
2,494,325	+				-0.9
2,494,383	-				-0.6
2,494,450	+				-0.6
2,494,451	-				+1.4
2,494,455	+				-1.3
2,494,456	-				-0.6
2,494,487	-				+0.4
2,494,596	+				+0.1
2,494,619	-				-1.1
2,494,619	-				+1.9
2,494,641	+		RR42_RS11640	0.12	-1.2
2,494,722	+		RR42_RS11640	0.32	-0.5
2,494,823	-		RR42_RS11640	0.56	+1.1
2,494,823	-		RR42_RS11640	0.56	-0.8
2,494,824	+		RR42_RS11640	0.57	-0.3
2,494,824	+		RR42_RS11640	0.57	-0.1
2,494,825	-		RR42_RS11640	0.57	+0.1
2,494,825	-		RR42_RS11640	0.57	+0.8
2,494,848	+		RR42_RS11640	0.62	-1.0
2,494,849	-		RR42_RS11640	0.63	+0.1
2,494,850	+		RR42_RS11640	0.63	-0.2
2,494,851	-		RR42_RS11640	0.63	-0.6
2,494,851	-		RR42_RS11640	0.63	+0.7
2,494,851	-		RR42_RS11640	0.63	+0.2
2,494,851	-		RR42_RS11640	0.63	-1.6
2,494,920	+		RR42_RS11640	0.80	+0.1
2,494,921	-		RR42_RS11640	0.80	-1.4
2,494,921	-		RR42_RS11640	0.80	+1.4
2,494,966	-				+0.9
2,495,027	+				-0.2
2,495,043	+				-0.5
2,495,043	+				-1.4
2,495,044	-				+0.3
2,495,044	-				-1.0
2,495,061	+				-0.2
2,495,062	-				-1.4
2,495,062	-				-0.6
2,495,090	+				+2.1
2,495,090	+				-0.3
2,495,090	+				-0.5
2,495,091	-				-0.9
2,495,093	-				+0.1