Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11280

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
2,412,886	+		RR42_RS11275	0.67	-0.5
2,412,887	-		RR42_RS11275	0.67	+0.2
2,412,887	-		RR42_RS11275	0.67	+2.5
2,412,950	+		RR42_RS11275	0.72	+0.9
2,412,951	-		RR42_RS11275	0.72	-1.6
2,412,951	-		RR42_RS11275	0.72	+0.8
2,412,951	-		RR42_RS11275	0.72	+0.7
2,413,353	-				-0.1
2,413,360	+				+0.1
2,413,360	+				+0.6
2,413,361	-				+0.7
2,413,361	-				-0.0
2,413,368	+				-0.1
2,413,368	+				+0.5
2,413,368	+				-0.5
2,413,368	+				-1.2
2,413,369	-				-0.5
2,413,609	+				-0.5
2,413,610	-				-0.4
2,413,620	+				+0.7
2,413,621	-				-0.6
2,413,621	-				+0.5
2,413,621	-				-0.9
2,413,867	+		RR42_RS11280	0.48	-0.6
2,413,966	+		RR42_RS11280	0.71	-0.8
2,414,096	-				-1.2
2,414,154	-				+0.5
2,414,172	-				-0.5
2,414,172	-				+0.2
2,414,497	+		RR42_RS11285	0.67	-1.5
2,414,535	-		RR42_RS11285	0.76	-1.7
2,414,565	+		RR42_RS11285	0.83	+0.8
2,414,565	+		RR42_RS11285	0.83	+0.1
2,414,566	-		RR42_RS11285	0.83	-1.0
2,414,566	-		RR42_RS11285	0.83	+1.2
2,414,566	-		RR42_RS11285	0.83	-0.8
2,414,728	-				-1.5
2,414,728	-				+1.2
2,414,830	+		RR42_RS11290	0.11	+1.1
2,414,830	+		RR42_RS11290	0.11	+0.1
2,414,831	-		RR42_RS11290	0.12	-1.1
2,414,890	+		RR42_RS11290	0.21	+0.3
2,414,891	-		RR42_RS11290	0.22	-0.7
2,414,891	-		RR42_RS11290	0.22	+1.3
2,414,896	+		RR42_RS11290	0.22	+1.1
2,414,896	+		RR42_RS11290	0.22	-2.0
2,414,897	-		RR42_RS11290	0.23	+0.7
2,414,897	-		RR42_RS11290	0.23	-0.5
2,414,897	-		RR42_RS11290	0.23	+0.5
2,414,941	+		RR42_RS11290	0.30	+0.5
2,414,942	-		RR42_RS11290	0.30	-0.2
2,414,942	-		RR42_RS11290	0.30	+0.4
2,414,942	-		RR42_RS11290	0.30	-2.3
2,414,979	-		RR42_RS11290	0.36	-2.1
2,415,019	+		RR42_RS11290	0.43	+0.5
2,415,019	+		RR42_RS11290	0.43	-1.0
2,415,020	-		RR42_RS11290	0.43	-0.7
2,415,020	-		RR42_RS11290	0.43	+0.9
2,415,058	+		RR42_RS11290	0.49	+0.2
2,415,059	-		RR42_RS11290	0.49	+0.7