Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS10230

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
2,188,134	+		RR42_RS10225	0.21	+0.5
2,188,134	+		RR42_RS10225	0.21	-0.6
2,188,167	+		RR42_RS10225	0.24	-1.0
2,188,167	+		RR42_RS10225	0.24	-0.7
2,188,404	+		RR42_RS10225	0.49	-1.1
2,188,404	+		RR42_RS10225	0.49	-0.5
2,188,663	+		RR42_RS10225	0.75	-1.1
2,188,843	+				+1.0
2,188,843	+				-0.7
2,188,844	-				-0.9
2,188,927	-				-1.3
2,189,114	+				-0.8
2,189,115	-				-0.5
2,189,194	+		RR42_RS10230	0.14	+2.3
2,189,414	-		RR42_RS10230	0.26	-0.6
2,189,470	+		RR42_RS10230	0.29	-0.5
2,189,471	-		RR42_RS10230	0.29	-0.0
2,189,586	+		RR42_RS10230	0.35	-0.5
2,189,754	+		RR42_RS10230	0.45	+0.7
2,189,770	+		RR42_RS10230	0.46	-0.7
2,189,771	-		RR42_RS10230	0.46	-0.5
2,189,788	+		RR42_RS10230	0.47	-0.4
2,190,137	+		RR42_RS10230	0.66	-0.6
2,190,138	-		RR42_RS10230	0.66	-0.3
2,190,546	+		RR42_RS10230	0.88	-1.3
2,190,549	+		RR42_RS10230	0.89	+0.2
2,190,651	-				+0.3
2,190,722	-				+1.2
2,190,743	-				-0.5
2,191,067	+				+3.5
2,191,067	+				+0.5
2,191,068	-				+0.5
2,191,068	-				-1.7
2,191,068	-				+0.7
2,191,235	-		RR42_RS10235	0.17	+0.5
2,191,297	-		RR42_RS10235	0.20	+0.9