Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS10130

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
2,169,582	+		RR42_RS10125	0.68	-0.2
2,169,607	+		RR42_RS10125	0.69	-1.9
2,169,645	+		RR42_RS10125	0.70	-0.8
2,169,749	+		RR42_RS10125	0.73	-0.6
2,169,749	+		RR42_RS10125	0.73	-1.2
2,169,803	+		RR42_RS10125	0.75	-0.3
2,169,804	-		RR42_RS10125	0.75	+0.2
2,169,805	+		RR42_RS10125	0.75	-1.0
2,169,805	+		RR42_RS10125	0.75	+0.6
2,169,805	+		RR42_RS10125	0.75	-0.8
2,169,805	+		RR42_RS10125	0.75	+0.7
2,169,805	+		RR42_RS10125	0.75	+0.5
2,169,805	+		RR42_RS10125	0.75	+0.2
2,169,805	+		RR42_RS10125	0.75	-0.7
2,169,806	-		RR42_RS10125	0.75	+1.1
2,169,806	-		RR42_RS10125	0.75	-0.5
2,169,806	-		RR42_RS10125	0.75	+0.1
2,169,806	-		RR42_RS10125	0.75	-0.2
2,169,806	-		RR42_RS10125	0.75	+0.6
2,169,808	+		RR42_RS10125	0.75	-0.4
2,169,808	+		RR42_RS10125	0.75	-0.7
2,169,809	-		RR42_RS10125	0.75	-0.3
2,169,809	-		RR42_RS10125	0.75	+0.3
2,169,840	-		RR42_RS10125	0.76	-0.7
2,169,843	+		RR42_RS10125	0.76	+0.3
2,169,900	+		RR42_RS10125	0.78	-1.7
2,169,901	-		RR42_RS10125	0.78	-0.7
2,169,914	+		RR42_RS10125	0.79	+0.0
2,169,914	+		RR42_RS10125	0.79	-0.1
2,169,915	-		RR42_RS10125	0.79	+0.0
2,169,955	-		RR42_RS10125	0.80	-0.9
2,169,979	+		RR42_RS10125	0.81	-1.3
2,169,980	-		RR42_RS10125	0.81	-1.1
2,169,980	-		RR42_RS10125	0.81	-0.7
2,169,980	-		RR42_RS10125	0.81	-0.2
2,169,989	+		RR42_RS10125	0.81	+0.2
2,169,989	+		RR42_RS10125	0.81	+2.1
2,169,990	-		RR42_RS10125	0.81	-0.5
2,170,179	-		RR42_RS10125	0.87	+0.3
2,170,207	-		RR42_RS10125	0.88	-0.1
2,170,207	-		RR42_RS10125	0.88	+0.0
2,170,207	-		RR42_RS10125	0.88	+0.8
2,170,351	-				+0.1
2,170,402	+				+0.7
2,170,402	+				+1.5
2,170,402	+				-2.0
2,170,402	+				-0.6
2,170,413	-				-0.3
2,170,697	+		RR42_RS10130	0.15	-0.2
2,170,698	-		RR42_RS10130	0.15	+0.8
2,170,698	-		RR42_RS10130	0.15	+1.5
2,170,847	+		RR42_RS10130	0.33	+0.5
2,170,870	+		RR42_RS10130	0.36	-0.3
2,170,870	+		RR42_RS10130	0.36	-1.7
2,170,871	-		RR42_RS10130	0.36	-0.1
2,170,917	+		RR42_RS10130	0.42	+0.2
2,170,917	+		RR42_RS10130	0.42	+1.7
2,170,917	+		RR42_RS10130	0.42	-0.7
2,170,918	-		RR42_RS10130	0.42	+1.3
2,170,918	-		RR42_RS10130	0.42	+1.7
2,171,012	+		RR42_RS10130	0.54	+1.9
2,171,012	+		RR42_RS10130	0.54	+0.6
2,171,012	+		RR42_RS10130	0.54	-0.2
2,171,012	+		RR42_RS10130	0.54	+0.4
2,171,012	+		RR42_RS10130	0.54	-1.0
2,171,013	-		RR42_RS10130	0.54	-0.6
2,171,013	-		RR42_RS10130	0.54	-0.3
2,171,013	-		RR42_RS10130	0.54	+0.1
2,171,013	-		RR42_RS10130	0.54	+2.5
2,171,013	-		RR42_RS10130	0.54	+0.2
2,171,013	-		RR42_RS10130	0.54	-0.1
2,171,013	-		RR42_RS10130	0.54	-0.1
2,171,016	+		RR42_RS10130	0.55	-0.3
2,171,016	+		RR42_RS10130	0.55	-0.3
2,171,017	-		RR42_RS10130	0.55	-1.5
2,171,044	+		RR42_RS10130	0.58	-1.5
2,171,047	+		RR42_RS10130	0.59	-1.2
2,171,047	+		RR42_RS10130	0.59	-1.0
2,171,048	-		RR42_RS10130	0.59	-0.5
2,171,048	-		RR42_RS10130	0.59	+0.2
2,171,048	-		RR42_RS10130	0.59	+0.1
2,171,048	-		RR42_RS10130	0.59	-0.0
2,171,142	+		RR42_RS10130	0.71	+0.5
2,171,143	-		RR42_RS10130	0.71	-0.7
2,171,143	-		RR42_RS10130	0.71	-2.0
2,171,154	-		RR42_RS10130	0.72	+0.1
2,171,154	-		RR42_RS10130	0.72	-1.1
2,171,255	-		RR42_RS10130	0.85	+0.5
2,171,328	+				+0.9
2,171,370	+				-0.5
2,171,371	-				+0.2
2,171,389	+				-0.7
2,171,409	-				+1.8
2,171,409	-				-0.2
2,171,411	+				-1.3
2,171,412	-				-0.8
2,171,412	-				-0.5
2,171,414	+				-0.1
2,171,415	-				+1.7
2,171,457	+				-0.5
2,171,458	-				+0.5
2,171,458	-				+1.7
2,171,524	+				+1.2
2,171,551	+				+0.2
2,171,552	-				+0.2
2,171,552	-				-0.1
2,171,686	-				-1.3
2,171,686	-				-0.4
2,171,686	-				+0.9
2,171,686	-				+0.6
2,171,695	+				+1.5
2,171,696	-				-1.1
2,171,696	-				+0.0
2,171,959	+				+0.3
2,171,959	+				+1.4
2,171,959	+				+1.7
2,171,959	+				+0.1
2,171,960	-				+0.8
2,171,960	-				+0.4
2,172,135	+				-0.8
2,172,135	+				-0.3
2,172,135	+				+0.1
2,172,136	-				-1.8
2,172,136	-				-0.1
2,172,238	+				-0.7
2,172,248	+				-0.6
2,172,249	-				-0.3
2,172,269	+				+0.3
2,172,270	-				-0.4
2,172,307	-				-0.3
2,172,307	-				-1.4
2,172,307	-				+0.1
2,172,307	-				-0.2
2,172,318	-				-0.0
2,172,332	-				-0.5