Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS10055

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
2,148,072	+				-0.7
2,148,125	+				-0.6
2,148,125	+				-1.5
2,148,159	+				+0.2
2,148,159	+				-0.5
2,148,159	+				-1.5
2,148,160	-				-1.1
2,148,160	-				-1.8
2,148,424	-		RR42_RS10050	0.24	+0.1
2,148,424	-		RR42_RS10050	0.24	+0.4
2,148,424	-		RR42_RS10050	0.24	-0.1
2,148,424	-		RR42_RS10050	0.24	-0.1
2,148,568	+		RR42_RS10050	0.47	-1.1
2,148,569	-		RR42_RS10050	0.47	+1.6
2,148,576	+		RR42_RS10050	0.48	-1.5
2,148,581	-		RR42_RS10050	0.49	-0.8
2,148,631	-		RR42_RS10050	0.57	-0.1
2,148,775	+		RR42_RS10050	0.80	-0.3
2,148,776	-		RR42_RS10050	0.81	+0.1
2,148,776	-		RR42_RS10050	0.81	-0.6
2,148,894	+				+0.4
2,148,930	-				-2.1
2,148,975	-				-1.7
2,148,996	+		RR42_RS10055	0.13	+0.8
2,148,997	-		RR42_RS10055	0.13	-0.4
2,148,997	-		RR42_RS10055	0.13	-0.1
2,148,997	-		RR42_RS10055	0.13	-0.1
2,149,182	+		RR42_RS10055	0.43	+0.5
2,149,182	+		RR42_RS10055	0.43	+0.8
2,149,183	-		RR42_RS10055	0.43	-0.7
2,149,183	-		RR42_RS10055	0.43	-0.2
2,149,183	-		RR42_RS10055	0.43	+0.1
2,149,183	-		RR42_RS10055	0.43	-1.3
2,149,183	-		RR42_RS10055	0.43	-1.5
2,149,183	-		RR42_RS10055	0.43	-2.3
2,149,183	-		RR42_RS10055	0.43	-0.7
2,149,183	-		RR42_RS10055	0.43	+0.5
2,149,183	-		RR42_RS10055	0.43	-0.4
2,149,183	-		RR42_RS10055	0.43	+0.1
2,149,184	+		RR42_RS10055	0.43	+0.3
2,149,184	+		RR42_RS10055	0.43	-0.5
2,149,184	+		RR42_RS10055	0.43	+0.9
2,149,184	+		RR42_RS10055	0.43	-1.2
2,149,185	-		RR42_RS10055	0.43	+0.4
2,149,185	-		RR42_RS10055	0.43	+0.2
2,149,226	+		RR42_RS10055	0.50	-0.4
2,149,227	-		RR42_RS10055	0.50	+0.6
2,149,227	-		RR42_RS10055	0.50	+0.7
2,149,379	+		RR42_RS10055	0.74	-0.2
2,149,380	-		RR42_RS10055	0.74	-0.0
2,149,490	-				-1.0
2,149,584	+				+1.2
2,149,584	+				-2.4
2,149,584	+				-0.6
2,149,584	+				+0.0
2,149,585	-				-0.6
2,149,754	-		RR42_RS10060	0.17	-2.0
2,149,842	+		RR42_RS10060	0.26	-0.2
2,150,005	+		RR42_RS10060	0.42	-0.3
2,150,005	+		RR42_RS10060	0.42	+0.2
2,150,005	+		RR42_RS10060	0.42	-1.4
2,150,006	-		RR42_RS10060	0.42	+0.4
2,150,006	-		RR42_RS10060	0.42	+1.2
2,150,006	-		RR42_RS10060	0.42	-1.8
2,150,006	-		RR42_RS10060	0.42	-0.9
2,150,006	-		RR42_RS10060	0.42	-0.7
2,150,173	+		RR42_RS10060	0.58	+0.6
2,150,174	-		RR42_RS10060	0.58	+2.2
2,150,176	+		RR42_RS10060	0.58	-0.8
2,150,176	+		RR42_RS10060	0.58	-1.2
2,150,176	+		RR42_RS10060	0.58	-0.9
2,150,176	+		RR42_RS10060	0.58	+0.6
2,150,177	-		RR42_RS10060	0.58	-0.9
2,150,238	-		RR42_RS10060	0.64	-0.3
2,150,314	-		RR42_RS10060	0.72	-0.3
2,150,314	-		RR42_RS10060	0.72	-0.7
2,150,314	-		RR42_RS10060	0.72	+1.3