Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS09955

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
2,123,340	+		RR42_RS09945	0.47	-1.2
2,123,438	-		RR42_RS09945	0.74	+0.9
2,123,485	+		RR42_RS09945	0.87	+0.3
2,123,486	-		RR42_RS09945	0.87	-0.0
2,123,499	+				+0.3
2,123,557	-				-1.3
2,123,568	+				-0.3
2,123,569	-				+0.3
2,123,585	+				-0.5
2,123,585	+				+0.0
2,123,711	-				-2.1
2,123,849	+				-0.1
2,123,849	+				-0.1
2,123,973	+		RR42_RS09950	0.31	+0.1
2,123,974	-		RR42_RS09950	0.31	-1.6
2,123,974	-		RR42_RS09950	0.31	-0.4
2,123,974	-		RR42_RS09950	0.31	+0.0
2,124,021	+		RR42_RS09950	0.43	-0.1
2,124,022	-		RR42_RS09950	0.43	-0.3
2,124,037	+		RR42_RS09950	0.47	+0.4
2,124,038	-		RR42_RS09950	0.47	-1.1
2,124,041	+		RR42_RS09950	0.48	-0.4
2,124,095	+		RR42_RS09950	0.61	+0.5
2,124,199	-		RR42_RS09950	0.87	+1.1
2,124,400	+		RR42_RS09955	0.30	+0.4
2,124,404	+		RR42_RS09955	0.31	-1.1
2,124,404	+		RR42_RS09955	0.31	-0.5
2,124,405	-		RR42_RS09955	0.31	+0.4
2,124,405	-		RR42_RS09955	0.31	-0.2
2,124,405	-		RR42_RS09955	0.31	+0.2
2,124,405	-		RR42_RS09955	0.31	-0.9
2,124,405	-		RR42_RS09955	0.31	-1.3
2,124,405	-		RR42_RS09955	0.31	+0.2
2,124,414	+		RR42_RS09955	0.33	-2.5
2,124,414	+		RR42_RS09955	0.33	-0.4
2,124,415	-		RR42_RS09955	0.33	-0.4
2,124,415	-		RR42_RS09955	0.33	+0.0
2,124,415	-		RR42_RS09955	0.33	+2.5
2,124,419	-		RR42_RS09955	0.34	-0.5
2,124,617	+		RR42_RS09955	0.75	-0.7
2,124,717	+				+0.9
2,124,717	+				+0.2
2,124,941	+				-0.3
2,124,941	+				-0.9
2,125,031	-		RR42_RS09960	0.13	-0.7
2,125,033	+		RR42_RS09960	0.14	-0.0
2,125,034	-		RR42_RS09960	0.14	-0.3
2,125,143	-		RR42_RS09960	0.28	-1.1
2,125,363	+		RR42_RS09960	0.58	-2.0
2,125,443	-		RR42_RS09960	0.68	-0.8
2,125,668	+				-0.6