Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS09520

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
2,017,171	+		RR42_RS09510	0.74	+0.3
2,017,172	-		RR42_RS09510	0.74	-1.2
2,017,172	-		RR42_RS09510	0.74	-0.6
2,017,195	+		RR42_RS09510	0.77	+0.1
2,017,195	+		RR42_RS09510	0.77	+0.2
2,017,196	-		RR42_RS09510	0.77	+0.6
2,017,216	+		RR42_RS09510	0.79	+1.0
2,017,312	+		RR42_RS09510	0.89	+1.0
2,017,312	+		RR42_RS09510	0.89	-0.8
2,017,313	-		RR42_RS09510	0.89	-0.7
2,017,313	-		RR42_RS09510	0.89	-1.2
2,017,334	-				-0.1
2,017,508	+				-0.2
2,017,558	+		RR42_RS09515	0.11	+1.4
2,017,559	-		RR42_RS09515	0.11	+0.3
2,017,897	-				+0.7
2,018,179	+		RR42_RS09520	0.42	-0.8
2,018,180	-		RR42_RS09520	0.43	-0.6
2,018,180	-		RR42_RS09520	0.43	+0.5
2,018,180	-		RR42_RS09520	0.43	-0.9
2,018,480	+		RR42_RS09520	0.85	+0.2
2,018,480	+		RR42_RS09520	0.85	+1.6
2,018,481	-		RR42_RS09520	0.85	+1.8
2,018,481	-		RR42_RS09520	0.85	-0.1
2,018,481	-		RR42_RS09520	0.85	+0.6
2,018,481	-		RR42_RS09520	0.85	-0.9
2,018,561	-				+0.9
2,018,729	-		RR42_RS09525	0.10	+0.3
2,018,729	-		RR42_RS09525	0.10	+0.9
2,018,919	+		RR42_RS09525	0.24	+0.2
2,019,420	+		RR42_RS09525	0.62	+0.2