Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS08660

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
1,814,141	+		RR42_RS08655	0.32	-1.4
1,814,142	-		RR42_RS08655	0.32	-2.0
1,814,204	+		RR42_RS08655	0.38	+0.4
1,814,324	+		RR42_RS08655	0.50	-0.6
1,814,324	+		RR42_RS08655	0.50	-0.5
1,814,324	+		RR42_RS08655	0.50	-0.9
1,814,325	-		RR42_RS08655	0.50	-1.7
1,814,325	-		RR42_RS08655	0.50	-0.0
1,814,325	-		RR42_RS08655	0.50	+0.5
1,814,339	+		RR42_RS08655	0.51	+0.1
1,814,340	-		RR42_RS08655	0.51	-0.7
1,814,340	-		RR42_RS08655	0.51	-0.3
1,814,402	+		RR42_RS08655	0.57	+0.5
1,814,435	+		RR42_RS08655	0.60	-0.9
1,814,436	-		RR42_RS08655	0.60	-0.0
1,814,534	+		RR42_RS08655	0.70	+1.2
1,814,534	+		RR42_RS08655	0.70	-0.2
1,814,535	-		RR42_RS08655	0.70	+0.6
1,814,623	+		RR42_RS08655	0.78	+1.2
1,814,816	+				-1.0
1,814,817	-				-0.8
1,814,916	-				-1.2
1,814,918	-				+0.8
1,814,959	+				-0.2
1,814,959	+				-0.8
1,814,994	-				-0.5
1,815,141	+		RR42_RS08660	0.11	+0.5
1,815,141	+		RR42_RS08660	0.11	+0.8
1,815,142	-		RR42_RS08660	0.11	-1.5
1,815,152	+		RR42_RS08660	0.12	+1.8
1,815,167	+		RR42_RS08660	0.13	+0.9
1,815,168	-		RR42_RS08660	0.13	+0.6
1,815,168	-		RR42_RS08660	0.13	-0.8
1,815,169	+		RR42_RS08660	0.13	-0.6
1,815,169	+		RR42_RS08660	0.13	+0.1
1,815,170	-		RR42_RS08660	0.14	+0.1
1,815,170	-		RR42_RS08660	0.14	+0.9
1,815,242	+		RR42_RS08660	0.21	+0.0
1,815,242	+		RR42_RS08660	0.21	+0.2
1,815,333	+		RR42_RS08660	0.31	+0.1
1,815,333	+		RR42_RS08660	0.31	+1.4
1,815,334	-		RR42_RS08660	0.31	-0.1
1,815,334	-		RR42_RS08660	0.31	-0.0
1,815,334	-		RR42_RS08660	0.31	+0.3
1,815,341	-		RR42_RS08660	0.31	-0.6
1,815,350	-		RR42_RS08660	0.32	+2.5
1,815,367	+		RR42_RS08660	0.34	-0.2
1,815,367	+		RR42_RS08660	0.34	-1.0
1,815,379	-		RR42_RS08660	0.35	+0.7
1,815,469	+		RR42_RS08660	0.45	-0.1
1,815,469	+		RR42_RS08660	0.45	+1.5
1,815,470	-		RR42_RS08660	0.45	+1.2
1,815,543	+		RR42_RS08660	0.52	-0.0
1,815,544	-		RR42_RS08660	0.53	+0.5
1,815,555	-		RR42_RS08660	0.54	+1.0
1,815,653	-		RR42_RS08660	0.64	+0.2
1,815,697	-		RR42_RS08660	0.68	-0.5
1,815,707	+		RR42_RS08660	0.69	+0.2
1,815,726	+		RR42_RS08660	0.71	-0.1
1,815,726	+		RR42_RS08660	0.71	-0.5
1,815,865	+		RR42_RS08660	0.86	+0.8
1,815,988	-				+0.5
1,816,094	-				-1.5
1,816,094	-				+0.5
1,816,152	-		RR42_RS08665	0.19	-1.5
1,816,465	-				+0.7
1,816,519	-				-0.8
1,816,686	+				+0.6
1,816,733	-				-1.0