Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07625

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
1,632,541	+				+0.2
1,632,541	+				+0.6
1,632,667	+		RR42_RS07620	0.11	-0.0
1,632,688	+		RR42_RS07620	0.15	+0.2
1,632,689	-		RR42_RS07620	0.15	+1.5
1,632,866	-		RR42_RS07620	0.47	-0.2
1,632,898	+		RR42_RS07620	0.53	-0.5
1,632,898	+		RR42_RS07620	0.53	-0.8
1,632,967	+		RR42_RS07620	0.65	-0.7
1,632,967	+		RR42_RS07620	0.65	+0.9
1,632,968	-		RR42_RS07620	0.65	+0.8
1,632,993	+		RR42_RS07620	0.70	-0.1
1,632,994	-		RR42_RS07620	0.70	+0.2
1,633,051	+		RR42_RS07620	0.80	-0.1
1,633,051	+		RR42_RS07620	0.80	-1.8
1,633,052	-		RR42_RS07620	0.81	-1.2
1,633,157	-				-0.9
1,633,157	-				-0.7
1,633,379	-				+0.0
1,633,520	+				-1.2
1,633,520	+				-0.7
1,633,563	+				-2.2
1,633,563	+				-0.4
1,633,564	-				-1.1
1,633,564	-				+0.5
1,633,599	+				-0.2
1,633,599	+				+0.4
1,633,599	+				-0.2
1,633,659	+		RR42_RS07625	0.14	-1.7
1,633,697	+		RR42_RS07625	0.18	-0.3
1,633,778	+		RR42_RS07625	0.26	+0.2
1,633,779	-		RR42_RS07625	0.26	-0.4
1,634,137	+		RR42_RS07625	0.63	+0.5
1,634,138	-		RR42_RS07625	0.63	+1.3
1,634,182	+		RR42_RS07625	0.67	-1.0
1,634,182	+		RR42_RS07625	0.67	+0.4
1,634,183	-		RR42_RS07625	0.67	-0.3
1,634,183	-		RR42_RS07625	0.67	+0.9
1,634,230	+		RR42_RS07625	0.72	-0.6
1,634,230	+		RR42_RS07625	0.72	+1.5
1,634,230	+		RR42_RS07625	0.72	+0.5
1,634,231	-		RR42_RS07625	0.72	-0.2
1,634,231	-		RR42_RS07625	0.72	+0.5
1,634,231	-		RR42_RS07625	0.72	-0.5
1,634,288	+		RR42_RS07625	0.78	-2.0
1,634,298	+		RR42_RS07625	0.79	+1.3
1,634,299	-		RR42_RS07625	0.79	-1.0
1,634,299	-		RR42_RS07625	0.79	-0.8
1,634,367	+		RR42_RS07625	0.86	+0.9
1,634,367	+		RR42_RS07625	0.86	+1.3
1,634,368	-		RR42_RS07625	0.86	+0.5
1,634,499	+				-0.6
1,634,499	+				+0.4
1,634,499	+				-0.7
1,634,500	-				-0.2
1,634,638	+				+0.0
1,634,638	+				-0.1
1,634,638	+				+0.3
1,634,638	+				-1.8
1,634,639	-				+0.3
1,634,639	-				-0.9
1,634,639	-				-1.2
1,634,639	-				+1.2
1,634,668	-				-0.8
1,634,668	-				+0.1
1,634,722	-				-0.4
1,634,722	-				+0.1
1,634,722	-				-0.2
1,634,773	+				-0.2
1,635,106	-		RR42_RS07630	0.49	+1.1
1,635,106	-		RR42_RS07630	0.49	+0.3
1,635,378	-				-0.9
1,635,378	-				+1.2
1,635,378	-				+0.4
1,635,407	+				+0.1
1,635,407	+				-1.5
1,635,407	+				+0.0
1,635,408	-				-0.4
1,635,408	-				-0.7
1,635,438	+				-0.3
1,635,438	+				+0.4
1,635,438	+				+0.7
1,635,438	+				-1.7
1,635,439	-				-0.7
1,635,439	-				-1.8