Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07565

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
1,617,728	+		RR42_RS07560	0.49	+0.2
1,617,729	-		RR42_RS07560	0.49	+0.2
1,617,825	-		RR42_RS07560	0.55	-0.4
1,617,849	+		RR42_RS07560	0.57	+1.2
1,617,850	-		RR42_RS07560	0.57	+1.0
1,617,891	-		RR42_RS07560	0.59	-0.2
1,617,979	+		RR42_RS07560	0.65	-0.4
1,617,980	-		RR42_RS07560	0.65	+1.0
1,618,082	+		RR42_RS07560	0.71	-0.3
1,618,089	+		RR42_RS07560	0.72	-0.5
1,618,089	+		RR42_RS07560	0.72	-0.6
1,618,090	-		RR42_RS07560	0.72	-0.5
1,618,225	+		RR42_RS07560	0.80	-1.0
1,618,225	+		RR42_RS07560	0.80	+0.3
1,618,225	+		RR42_RS07560	0.80	+0.2
1,618,225	+		RR42_RS07560	0.80	-0.1
1,618,226	-		RR42_RS07560	0.80	+0.9
1,618,234	+		RR42_RS07560	0.81	-1.0
1,618,235	-		RR42_RS07560	0.81	-0.5
1,618,235	-		RR42_RS07560	0.81	+0.9
1,618,259	+		RR42_RS07560	0.82	-0.7
1,618,259	+		RR42_RS07560	0.82	-0.2
1,618,259	+		RR42_RS07560	0.82	-1.3
1,618,259	+		RR42_RS07560	0.82	-0.9
1,618,259	+		RR42_RS07560	0.82	-1.1
1,618,260	-		RR42_RS07560	0.82	+0.7
1,618,260	-		RR42_RS07560	0.82	+0.6
1,618,260	-		RR42_RS07560	0.82	-1.9
1,618,260	-		RR42_RS07560	0.82	-0.5
1,618,265	+		RR42_RS07560	0.83	+0.9
1,618,266	-		RR42_RS07560	0.83	-1.5
1,618,266	-		RR42_RS07560	0.83	-0.3
1,618,277	+		RR42_RS07560	0.84	+0.3
1,618,277	+		RR42_RS07560	0.84	-0.8
1,618,277	+		RR42_RS07560	0.84	+0.2
1,618,278	-		RR42_RS07560	0.84	-0.5
1,618,278	-		RR42_RS07560	0.84	+0.5
1,618,278	-		RR42_RS07560	0.84	-1.7
1,618,370	+		RR42_RS07560	0.89	-1.6
1,618,371	-		RR42_RS07560	0.89	-0.2
1,618,371	-		RR42_RS07560	0.89	+0.2
1,618,376	+		RR42_RS07560	0.90	-0.1
1,618,376	+		RR42_RS07560	0.90	+0.0
1,618,376	+		RR42_RS07560	0.90	+0.4
1,618,385	+				-0.5
1,618,385	+				+0.5
1,618,385	+				-0.4
1,618,385	+				+0.2
1,618,385	+				+0.5
1,618,386	-				-1.6
1,618,431	-				+0.4
1,618,439	+				+0.1
1,618,439	+				+0.9
1,618,439	+				-0.5
1,618,440	-				+0.1
1,618,440	-				-0.1
1,618,440	-				-0.1
1,618,532	+				-1.1
1,618,532	+				-0.4
1,618,533	-				-0.7
1,618,533	-				+0.5
1,618,646	-				+0.3
1,618,677	+				+1.5
1,618,992	+		RR42_RS07565	0.12	-1.9
1,618,992	+		RR42_RS07565	0.12	-1.3
1,618,993	-		RR42_RS07565	0.13	-2.1
1,618,993	-		RR42_RS07565	0.13	-0.1
1,619,000	-		RR42_RS07565	0.13	-0.6
1,619,473	-		RR42_RS07565	0.33	-1.5
1,619,762	+		RR42_RS07565	0.45	-1.0
1,619,762	+		RR42_RS07565	0.45	+1.3
1,620,401	+		RR42_RS07565	0.72	-2.5
1,620,407	+		RR42_RS07565	0.72	-1.8
1,620,408	-		RR42_RS07565	0.72	-1.9
1,620,408	-		RR42_RS07565	0.72	-1.1
1,620,408	-		RR42_RS07565	0.72	+0.9
1,620,411	-		RR42_RS07565	0.72	-0.6
1,620,615	-		RR42_RS07565	0.81	-1.3
1,620,729	-		RR42_RS07565	0.86	-1.8
1,620,737	+		RR42_RS07565	0.86	+0.0
1,620,737	+		RR42_RS07565	0.86	-3.2
1,620,737	+		RR42_RS07565	0.86	-0.8
1,620,738	-		RR42_RS07565	0.86	-1.9
1,620,863	+				-1.8
1,620,863	+				-1.7
1,620,974	-				+0.3
1,621,207	+				-0.6
1,621,208	-				-0.1
1,621,255	+				+0.9
1,621,255	+				-0.7
1,621,255	+				-0.9
1,621,255	+				-0.8
1,621,256	-				-0.9
1,621,256	-				-0.1
1,621,256	-				-0.6
1,621,733	-		RR42_RS07570	0.57	-1.3
1,621,786	+		RR42_RS07570	0.64	+0.9
1,621,787	-		RR42_RS07570	0.64	+1.8
1,621,870	+		RR42_RS07570	0.74	-1.2
1,621,958	+		RR42_RS07570	0.85	-1.3
1,621,958	+		RR42_RS07570	0.85	-0.7
1,621,967	-		RR42_RS07570	0.86	-0.5