Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07555

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
1,613,711	+		RR42_RS07550	0.21	+0.3
1,613,711	+		RR42_RS07550	0.21	+0.9
1,613,712	-		RR42_RS07550	0.21	+0.9
1,613,787	+		RR42_RS07550	0.32	-0.8
1,613,814	+		RR42_RS07550	0.35	+0.5
1,613,814	+		RR42_RS07550	0.35	+1.0
1,613,814	+		RR42_RS07550	0.35	+0.9
1,613,814	+		RR42_RS07550	0.35	-0.8
1,613,814	+		RR42_RS07550	0.35	+0.8
1,613,814	+		RR42_RS07550	0.35	-1.3
1,613,814	+		RR42_RS07550	0.35	+0.5
1,613,815	-		RR42_RS07550	0.36	+0.1
1,613,815	-		RR42_RS07550	0.36	-0.3
1,613,815	-		RR42_RS07550	0.36	-0.2
1,613,815	-		RR42_RS07550	0.36	-0.8
1,613,815	-		RR42_RS07550	0.36	+0.4
1,613,815	-		RR42_RS07550	0.36	+0.5
1,613,815	-		RR42_RS07550	0.36	-1.6
1,613,815	-		RR42_RS07550	0.36	+0.3
1,614,154	-		RR42_RS07550	0.83	-0.5
1,614,154	-		RR42_RS07550	0.83	+0.3
1,614,353	+				+0.7
1,614,354	-				+0.9
1,614,468	+				-0.3
1,614,468	+				-0.4
1,614,469	-				+1.2
1,614,494	+				-0.2
1,614,494	+				+0.8
1,614,560	-				+0.5
1,614,599	-				+1.2
1,614,599	-				-0.3
1,614,717	+				+1.9
1,615,240	-		RR42_RS07555	0.33	-1.8
1,615,648	-		RR42_RS07555	0.55	-0.7
1,616,184	+		RR42_RS07555	0.83	-0.8
1,616,185	-		RR42_RS07555	0.83	+0.5
1,616,624	+				-0.2
1,616,624	+				-0.5
1,616,625	-				+1.1
1,616,625	-				+1.0
1,616,625	-				-1.1
1,616,638	+				-0.1
1,616,639	-				-0.2
1,616,809	-				-0.0
1,616,833	+				-2.0
1,616,906	+				-1.4
1,616,906	+				-0.1
1,616,906	+				-0.3
1,616,906	+				-1.1
1,616,907	-				+1.7
1,616,907	-				+1.8
1,616,907	-				+0.3
1,616,907	-				-0.6
1,616,907	-				-0.4
1,616,945	-				-0.8
1,617,068	-				+2.5
1,617,088	+				-0.3
1,617,119	+		RR42_RS07560	0.10	-0.4
1,617,120	-		RR42_RS07560	0.10	-0.1
1,617,312	+		RR42_RS07560	0.23	+0.3
1,617,312	+		RR42_RS07560	0.23	-0.2
1,617,313	-		RR42_RS07560	0.23	-2.0
1,617,313	-		RR42_RS07560	0.23	+0.7
1,617,313	-		RR42_RS07560	0.23	+1.2
1,617,314	+		RR42_RS07560	0.23	+0.9
1,617,315	-		RR42_RS07560	0.23	-2.2
1,617,431	+		RR42_RS07560	0.30	-0.5
1,617,431	+		RR42_RS07560	0.30	+0.0
1,617,432	-		RR42_RS07560	0.30	-1.6
1,617,432	-		RR42_RS07560	0.30	-1.4
1,617,432	-		RR42_RS07560	0.30	+2.5
1,617,434	+		RR42_RS07560	0.30	-1.3
1,617,434	+		RR42_RS07560	0.30	+0.2
1,617,435	-		RR42_RS07560	0.30	+3.8
1,617,435	-		RR42_RS07560	0.30	-1.4
1,617,435	-		RR42_RS07560	0.30	-1.7