Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS06475

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
1,415,405	+		RR42_RS06465	0.87	-1.4
1,415,406	-		RR42_RS06465	0.88	-0.4
1,415,461	-				-2.9
1,415,582	-				+0.5
1,415,605	+				-0.2
1,415,605	+				-1.6
1,415,605	+				-1.0
1,415,605	+				+0.3
1,415,605	+				+0.4
1,415,606	-				-1.2
1,415,606	-				+0.5
1,415,606	-				+0.1
1,415,606	-				+1.1
1,415,606	-				+0.5
1,415,606	-				-0.3
1,415,636	+				+0.2
1,415,637	-				+0.2
1,415,728	+				-0.1
1,415,728	+				-0.2
1,415,729	-				-1.0
1,415,731	+				-0.3
1,415,731	+				-0.6
1,415,732	-				+1.4
1,415,732	-				-0.7
1,415,732	-				-0.9
1,415,732	-				-1.6
1,415,814	-				-1.8
1,415,816	-		RR42_RS06470	0.10	-0.7
1,415,855	-		RR42_RS06470	0.19	+0.3
1,416,123	-		RR42_RS06470	0.79	-1.0
1,416,182	+				-0.4
1,416,310	-				-0.2
1,416,316	+				-0.9
1,416,325	+				-0.8
1,416,378	+				-1.4
1,416,378	+				-1.5
1,416,378	+				+0.1
1,416,504	+				-0.3
1,416,504	+				-0.5
1,416,504	+				+0.3
1,416,504	+				+0.5
1,416,504	+				-1.3
1,416,509	+				-0.7
1,416,510	-				+0.4
1,416,510	-				-0.7
1,416,671	+		RR42_RS06475	0.15	-1.1
1,416,671	+		RR42_RS06475	0.15	+0.4
1,416,671	+		RR42_RS06475	0.15	-1.5
1,416,672	-		RR42_RS06475	0.15	-0.3
1,416,672	-		RR42_RS06475	0.15	-0.8
1,416,679	+		RR42_RS06475	0.16	-2.3
1,416,680	-		RR42_RS06475	0.16	-2.0
1,416,680	-		RR42_RS06475	0.16	+0.2
1,416,781	-		RR42_RS06475	0.21	-1.1
1,416,928	-		RR42_RS06475	0.29	-1.3
1,416,928	-		RR42_RS06475	0.29	-2.1
1,417,450	-		RR42_RS06475	0.56	+0.2
1,417,647	+		RR42_RS06475	0.67	-0.2
1,417,647	+		RR42_RS06475	0.67	-0.6
1,417,647	+		RR42_RS06475	0.67	-1.3
1,417,647	+		RR42_RS06475	0.67	-0.3
1,417,647	+		RR42_RS06475	0.67	-0.1
1,417,647	+		RR42_RS06475	0.67	-2.1
1,417,647	+		RR42_RS06475	0.67	-1.8
1,417,648	-		RR42_RS06475	0.67	-1.2
1,417,648	-		RR42_RS06475	0.67	-0.1
1,417,648	-		RR42_RS06475	0.67	-1.5
1,417,648	-		RR42_RS06475	0.67	-0.5
1,417,648	-		RR42_RS06475	0.67	-1.3
1,417,653	+		RR42_RS06475	0.67	-1.7
1,417,653	+		RR42_RS06475	0.67	-0.1
1,417,654	-		RR42_RS06475	0.67	-0.8
1,417,706	+		RR42_RS06475	0.70	-1.2
1,417,707	-		RR42_RS06475	0.70	-1.1
1,417,713	+		RR42_RS06475	0.70	-0.6
1,417,951	-		RR42_RS06475	0.83	-0.1
1,417,951	-		RR42_RS06475	0.83	-0.3
1,418,314	+				-0.3
1,418,314	+				+0.8
1,418,314	+				-0.8
1,418,452	+		RR42_RS06480	0.21	-1.1
1,418,519	-		RR42_RS06480	0.30	+0.7
1,418,596	-		RR42_RS06480	0.41	+2.5
1,418,596	-		RR42_RS06480	0.41	-0.6
1,418,602	+		RR42_RS06480	0.42	-0.1
1,418,602	+		RR42_RS06480	0.42	-1.4
1,418,962	+				+0.6
1,418,962	+				-1.3
1,418,962	+				-1.8
1,418,962	+				-0.9
1,418,962	+				-1.4
1,418,963	-				-1.2
1,418,963	-				+0.2
1,418,989	+				+0.0
1,419,060	+				-0.1
1,419,061	-				-0.1
1,419,061	-				-1.4
1,419,067	+				-1.9
1,419,138	+				+0.4
1,419,138	+				+0.6