Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS05850

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
1,284,386	+		RR42_RS05845	0.36	+2.5
1,284,386	+		RR42_RS05845	0.36	+1.6
1,284,387	-		RR42_RS05845	0.36	-0.2
1,284,387	-		RR42_RS05845	0.36	-1.0
1,284,494	+		RR42_RS05845	0.48	-0.2
1,284,494	+		RR42_RS05845	0.48	+1.9
1,284,494	+		RR42_RS05845	0.48	+0.5
1,284,495	-		RR42_RS05845	0.48	-1.7
1,284,500	+		RR42_RS05845	0.49	-0.4
1,284,500	+		RR42_RS05845	0.49	-0.6
1,284,500	+		RR42_RS05845	0.49	+0.3
1,284,500	+		RR42_RS05845	0.49	+0.6
1,284,500	+		RR42_RS05845	0.49	-0.5
1,284,500	+		RR42_RS05845	0.49	-0.4
1,284,500	+		RR42_RS05845	0.49	-0.5
1,284,500	+		RR42_RS05845	0.49	-0.7
1,284,501	-		RR42_RS05845	0.49	+0.3
1,284,501	-		RR42_RS05845	0.49	-0.8
1,284,501	-		RR42_RS05845	0.49	+0.2
1,284,501	-		RR42_RS05845	0.49	+0.7
1,284,501	-		RR42_RS05845	0.49	+0.5
1,284,632	+		RR42_RS05845	0.64	-0.7
1,284,632	+		RR42_RS05845	0.64	+1.3
1,284,632	+		RR42_RS05845	0.64	-1.5
1,284,632	+		RR42_RS05845	0.64	+0.2
1,284,632	+		RR42_RS05845	0.64	-0.5
1,284,632	+		RR42_RS05845	0.64	-1.8
1,284,632	+		RR42_RS05845	0.64	-0.4
1,284,632	+		RR42_RS05845	0.64	+0.6
1,284,632	+		RR42_RS05845	0.64	+0.4
1,284,632	+		RR42_RS05845	0.64	-0.9
1,284,633	-		RR42_RS05845	0.64	+0.5
1,284,633	-		RR42_RS05845	0.64	-0.1
1,284,633	-		RR42_RS05845	0.64	+0.4
1,284,698	+		RR42_RS05845	0.71	-0.7
1,284,699	-		RR42_RS05845	0.72	+0.0
1,284,704	+		RR42_RS05845	0.72	-0.3
1,284,704	+		RR42_RS05845	0.72	+0.5
1,284,704	+		RR42_RS05845	0.72	-0.1
1,284,705	-		RR42_RS05845	0.72	+1.1
1,284,887	+				-0.1
1,284,887	+				-0.1
1,284,888	-				+1.5
1,284,888	-				-0.3
1,284,888	-				+0.5
1,284,888	-				+0.2
1,284,888	-				+0.5
1,284,888	-				+0.9
1,284,888	-				-2.3
1,284,990	+				+0.2
1,284,992	+				+0.4
1,284,992	+				+0.4
1,284,993	-				+0.4
1,284,993	-				-0.0
1,285,058	+				+0.2
1,285,059	-				-0.3
1,285,059	-				-0.3
1,285,170	+				+0.5
1,285,239	+				+0.5
1,285,240	-				+0.3
1,285,352	+				-0.3
1,285,466	+		RR42_RS05850	0.31	-0.5
1,285,466	+		RR42_RS05850	0.31	-0.5
1,285,466	+		RR42_RS05850	0.31	-0.5
1,285,467	-		RR42_RS05850	0.31	-1.1
1,285,467	-		RR42_RS05850	0.31	-2.2
1,285,467	-		RR42_RS05850	0.31	+0.5
1,285,491	+		RR42_RS05850	0.38	-0.6
1,285,516	-		RR42_RS05850	0.45	-0.7
1,285,551	+		RR42_RS05850	0.55	+0.2
1,285,551	+		RR42_RS05850	0.55	-2.1
1,285,552	-		RR42_RS05850	0.55	+0.3
1,285,576	-		RR42_RS05850	0.62	-0.3
1,285,662	+		RR42_RS05850	0.87	-2.0
1,285,663	-		RR42_RS05850	0.87	+0.2
1,285,704	+				-0.1
1,285,724	+				-0.7
1,285,724	+				+0.3
1,285,725	-				+0.1
1,285,730	+				-0.8
1,285,914	+		RR42_RS05855	0.49	-0.4
1,285,914	+		RR42_RS05855	0.49	-0.5
1,285,915	-		RR42_RS05855	0.49	+1.1
1,285,915	-		RR42_RS05855	0.49	-0.1
1,285,921	-		RR42_RS05855	0.51	-0.3
1,286,076	+		RR42_RS05855	0.89	-0.4
1,286,077	-		RR42_RS05855	0.90	+2.5
1,286,077	-		RR42_RS05855	0.90	-0.1
1,286,596	+		RR42_RS05860	0.33	-1.0