Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS04850

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
1,079,543	-		RR42_RS04845	0.31	-1.4
1,079,572	+		RR42_RS04845	0.34	+0.5
1,079,608	+		RR42_RS04845	0.38	-0.4
1,079,716	+		RR42_RS04845	0.48	+0.3
1,079,833	+		RR42_RS04845	0.59	-0.5
1,079,834	-		RR42_RS04845	0.59	+0.4
1,079,834	-		RR42_RS04845	0.59	-0.8
1,079,920	-		RR42_RS04845	0.68	+0.0
1,080,028	+		RR42_RS04845	0.78	+1.5
1,080,029	-		RR42_RS04845	0.78	+0.9
1,080,253	+				-0.8
1,080,253	+				+0.2
1,080,253	+				+0.8
1,080,254	-				+0.1
1,080,355	+				-1.4
1,080,355	+				-1.6
1,080,356	-				-0.2
1,080,361	-				-0.4
1,080,441	+				+0.0
1,080,600	-		RR42_RS04850	0.52	-1.1
1,080,713	+		RR42_RS04850	0.82	-1.0
1,080,714	-		RR42_RS04850	0.83	-1.0
1,080,743	+				+0.5
1,081,165	+		RR42_RS04860	0.35	-0.6
1,081,166	-		RR42_RS04860	0.35	+0.3
1,081,231	-		RR42_RS04860	0.56	+0.1
1,081,282	+		RR42_RS04860	0.73	+0.5
1,081,283	-		RR42_RS04860	0.74	+0.8
1,081,423	+		RR42_RS04865	0.14	+0.0
1,081,439	+		RR42_RS04865	0.18	+0.2
1,081,573	+		RR42_RS04865	0.53	-0.9
1,081,574	-		RR42_RS04865	0.54	+1.7
1,081,580	-		RR42_RS04865	0.55	-0.2
1,081,580	-		RR42_RS04865	0.55	-0.6
1,081,580	-		RR42_RS04865	0.55	-1.2
1,081,580	-		RR42_RS04865	0.55	-0.5
1,081,612	+		RR42_RS04865	0.64	-1.5
1,081,612	+		RR42_RS04865	0.64	-1.2
1,081,612	+		RR42_RS04865	0.64	-0.1
1,081,612	+		RR42_RS04865	0.64	-2.3
1,081,612	+		RR42_RS04865	0.64	-0.1
1,081,613	-		RR42_RS04865	0.64	-0.8
1,081,642	+		RR42_RS04865	0.72	+0.6
1,081,642	+		RR42_RS04865	0.72	-1.0
1,081,642	+		RR42_RS04865	0.72	-0.2
1,081,643	-		RR42_RS04865	0.72	+0.6
1,081,643	-		RR42_RS04865	0.72	+0.8
1,081,643	-		RR42_RS04865	0.72	+0.6
1,081,667	-		RR42_RS04865	0.78	-0.8
1,081,720	-				-0.2