Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS04730
Experiment: R2A with Vancomycin 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with Vancomycin 0.5 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,052,407 | - | +0.4 | |||
1,052,407 | - | -1.5 | |||
1,052,490 | + | +1.3 | |||
1,052,490 | + | +0.1 | |||
1,052,490 | + | -0.1 | |||
1,052,490 | + | -1.7 | |||
1,052,491 | - | +1.5 | |||
1,052,491 | - | -1.5 | |||
1,052,524 | - | +0.3 | |||
1,052,628 | - | -1.1 | |||
1,053,900 | - | +0.9 | |||
1,054,482 | - | RR42_RS04735 | 0.66 | -0.9 | |
1,054,699 | - | -0.5 | |||
1,054,830 | - | -0.1 | |||
1,054,830 | - | +0.1 | |||
1,054,830 | - | +0.0 | |||
1,054,830 | - | +0.3 | |||
1,054,830 | - | -0.5 | |||
1,054,863 | - | -1.7 | |||
1,054,863 | - | +0.5 | |||
1,054,880 | - | +1.5 |
Or see this region's nucleotide sequence