Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS04640

Experiment: R2A with Vancomycin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.5 mg/ml
1,032,256	-		RR42_RS04635	0.88	+1.1
1,032,448	+				+0.2
1,032,448	+				+0.5
1,032,448	+				-1.5
1,032,448	+				+0.4
1,032,448	+				+0.4
1,032,448	+				-0.4
1,032,449	-				-0.3
1,032,449	-				+0.2
1,032,449	-				-0.2
1,032,605	+		RR42_RS04640	0.23	+2.5
1,032,606	-		RR42_RS04640	0.23	-1.8
1,032,606	-		RR42_RS04640	0.23	-0.4
1,032,821	+		RR42_RS04640	0.55	-0.7
1,032,822	-		RR42_RS04640	0.55	+0.9
1,032,838	+		RR42_RS04640	0.57	-0.3
1,032,838	+		RR42_RS04640	0.57	+0.2
1,032,851	+		RR42_RS04640	0.59	+0.9
1,032,851	+		RR42_RS04640	0.59	-0.8
1,032,851	+		RR42_RS04640	0.59	-0.3
1,032,851	+		RR42_RS04640	0.59	-1.0
1,032,960	+		RR42_RS04640	0.75	+0.2
1,032,961	-		RR42_RS04640	0.75	-1.2
1,033,031	+		RR42_RS04640	0.85	+0.8
1,033,032	-		RR42_RS04640	0.86	-3.0
1,033,032	-		RR42_RS04640	0.86	-1.1
1,033,032	-		RR42_RS04640	0.86	+0.5
1,033,032	-		RR42_RS04640	0.86	-1.5
1,033,109	+				-3.9
1,033,109	+				-1.8
1,033,110	-				-0.2
1,033,212	+				-0.0
1,033,212	+				-0.3
1,033,212	+				-1.0
1,033,213	-				+0.9
1,033,213	-				+0.7
1,033,311	+		RR42_RS04645	0.19	+0.1
1,033,339	-		RR42_RS04645	0.23	+0.3
1,033,365	+		RR42_RS04645	0.26	+0.9
1,033,366	-		RR42_RS04645	0.26	-0.5
1,033,393	-		RR42_RS04645	0.29	-0.5
1,033,977	+				+0.1
1,033,977	+				+0.3
1,033,978	-				-0.3
1,033,978	-				-1.8
1,034,002	+				-0.2
1,034,002	+				+0.1
1,034,003	-				-0.9
1,034,003	-				-0.7
1,034,003	-				-1.4