Experiment: Adenine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_4246 and Pf1N1B4_4247 are separated by 527 nucleotides Pf1N1B4_4247 and Pf1N1B4_4248 are separated by 161 nucleotides
Pf1N1B4_4246 - L-lactate permease, at 4,706,537 to 4,708,294
_4246
Pf1N1B4_4247 - D-aminopeptidase (EC 3.4.11.19), at 4,708,822 to 4,709,937
_4247
Pf1N1B4_4248 - Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2), at 4,710,099 to 4,711,202
_4248
Position (kb)
4708
4709
4710 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4708.250 kb on + strand at 4708.250 kb on + strand at 4708.311 kb on + strand at 4708.355 kb on + strand at 4708.355 kb on + strand at 4708.357 kb on + strand at 4708.358 kb on - strand at 4708.577 kb on + strand at 4708.578 kb on - strand at 4708.629 kb on + strand at 4708.630 kb on - strand at 4708.674 kb on + strand at 4708.674 kb on + strand at 4708.744 kb on + strand at 4708.775 kb on + strand at 4708.775 kb on + strand at 4708.775 kb on + strand at 4708.787 kb on - strand at 4708.812 kb on + strand at 4708.812 kb on + strand at 4708.813 kb on - strand at 4708.818 kb on + strand at 4708.823 kb on + strand at 4709.500 kb on + strand, within Pf1N1B4_4247 at 4709.500 kb on + strand, within Pf1N1B4_4247 at 4709.500 kb on + strand, within Pf1N1B4_4247 at 4709.501 kb on - strand, within Pf1N1B4_4247 at 4709.798 kb on + strand, within Pf1N1B4_4247 at 4709.798 kb on + strand, within Pf1N1B4_4247 at 4709.798 kb on + strand, within Pf1N1B4_4247 at 4709.798 kb on + strand, within Pf1N1B4_4247 at 4709.799 kb on - strand, within Pf1N1B4_4247 at 4709.799 kb on - strand, within Pf1N1B4_4247 at 4709.986 kb on + strand at 4710.094 kb on + strand at 4710.320 kb on - strand, within Pf1N1B4_4248 at 4710.544 kb on + strand, within Pf1N1B4_4248 at 4710.593 kb on - strand at 4710.823 kb on + strand, within Pf1N1B4_4248
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine (N) remove 4,708,250 + -1.4 4,708,250 + +0.0 4,708,311 + -0.0 4,708,355 + -0.4 4,708,355 + -0.2 4,708,357 + +0.1 4,708,358 - -1.0 4,708,577 + -0.4 4,708,578 - +0.9 4,708,629 + -1.4 4,708,630 - +0.8 4,708,674 + +1.4 4,708,674 + -1.4 4,708,744 + +0.6 4,708,775 + +0.9 4,708,775 + +0.6 4,708,775 + +1.9 4,708,787 - -1.4 4,708,812 + +1.7 4,708,812 + -0.4 4,708,813 - +0.9 4,708,818 + +1.6 4,708,823 + -2.0 4,709,500 + Pf1N1B4_4247 0.61 -0.4 4,709,500 + Pf1N1B4_4247 0.61 -0.4 4,709,500 + Pf1N1B4_4247 0.61 +0.6 4,709,501 - Pf1N1B4_4247 0.61 +1.1 4,709,798 + Pf1N1B4_4247 0.87 +0.9 4,709,798 + Pf1N1B4_4247 0.87 +0.3 4,709,798 + Pf1N1B4_4247 0.87 +0.6 4,709,798 + Pf1N1B4_4247 0.87 +1.1 4,709,799 - Pf1N1B4_4247 0.88 +0.6 4,709,799 - Pf1N1B4_4247 0.88 +2.1 4,709,986 + +1.6 4,710,094 + +0.1 4,710,320 - Pf1N1B4_4248 0.20 +1.1 4,710,544 + Pf1N1B4_4248 0.40 +0.4 4,710,593 - +0.6 4,710,823 + Pf1N1B4_4248 0.66 +1.2
Or see this region's nucleotide sequence