Experiment: ALP with Cobalt chloride 0.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3364 and Dsui_3365 are separated by 251 nucleotides Dsui_3365 and Dsui_3366 are separated by 120 nucleotides Dsui_3366 and Dsui_3367 are separated by 8 nucleotides
Dsui_3364: Dsui_3364 - alanine--tRNA ligase, at 3,603,585 to 3,606,278
_3364
Dsui_3365: Dsui_3365 - hypothetical protein, at 3,606,530 to 3,606,913
_3365
Dsui_3366: Dsui_3366 - glycerophosphoryl diester phosphodiesterase, at 3,607,034 to 3,607,840
_3366
Dsui_3367: Dsui_3367 - ABC-type sugar transport system, periplasmic component, at 3,607,849 to 3,609,213
_3367
Position (kb)
3607
3608 Strain fitness (log2 ratio)
-2
-1
0
1 at 3606.362 kb on - strand at 3606.402 kb on + strand at 3606.656 kb on + strand at 3606.702 kb on + strand at 3606.736 kb on - strand at 3606.737 kb on - strand, within Dsui_3365 at 3606.810 kb on - strand at 3606.837 kb on - strand at 3606.866 kb on - strand, within Dsui_3365 at 3606.866 kb on - strand at 3606.966 kb on - strand at 3607.017 kb on - strand at 3607.141 kb on - strand, within Dsui_3366 at 3607.141 kb on - strand, within Dsui_3366 at 3607.187 kb on - strand, within Dsui_3366 at 3607.286 kb on + strand at 3607.458 kb on - strand, within Dsui_3366 at 3607.462 kb on + strand at 3607.488 kb on - strand, within Dsui_3366 at 3607.531 kb on + strand at 3607.554 kb on - strand, within Dsui_3366 at 3607.609 kb on + strand at 3607.855 kb on - strand at 3607.944 kb on - strand at 3607.949 kb on - strand at 3607.967 kb on + strand at 3607.972 kb on + strand at 3608.097 kb on + strand at 3608.236 kb on - strand, within Dsui_3367 at 3608.275 kb on - strand, within Dsui_3367 at 3608.452 kb on - strand, within Dsui_3367 at 3608.497 kb on + strand at 3608.500 kb on - strand, within Dsui_3367 at 3608.505 kb on - strand, within Dsui_3367 at 3608.569 kb on - strand, within Dsui_3367 at 3608.684 kb on - strand, within Dsui_3367 at 3608.743 kb on - strand, within Dsui_3367 at 3608.775 kb on - strand, within Dsui_3367
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cobalt chloride 0.25 mM remove 3,606,362 - -0.8 3,606,402 + -1.5 3,606,656 + +0.8 3,606,702 + +0.8 3,606,736 - +0.8 3,606,737 - Dsui_3365 0.54 -2.0 3,606,810 - +0.8 3,606,837 - +0.8 3,606,866 - Dsui_3365 0.88 -0.2 3,606,866 - -0.2 3,606,966 - +0.8 3,607,017 - -0.2 3,607,141 - Dsui_3366 0.13 -0.8 3,607,141 - Dsui_3366 0.13 -0.2 3,607,187 - Dsui_3366 0.19 +0.8 3,607,286 + +0.8 3,607,458 - Dsui_3366 0.53 -1.6 3,607,462 + +0.8 3,607,488 - Dsui_3366 0.56 -1.2 3,607,531 + +0.8 3,607,554 - Dsui_3366 0.64 -1.6 3,607,609 + -0.8 3,607,855 - -0.7 3,607,944 - -1.0 3,607,949 - -0.3 3,607,967 + +0.8 3,607,972 + -0.2 3,608,097 + -0.2 3,608,236 - Dsui_3367 0.28 -1.4 3,608,275 - Dsui_3367 0.31 -0.5 3,608,452 - Dsui_3367 0.44 -2.2 3,608,497 + -0.8 3,608,500 - Dsui_3367 0.48 -0.5 3,608,505 - Dsui_3367 0.48 -0.2 3,608,569 - Dsui_3367 0.53 -0.6 3,608,684 - Dsui_3367 0.61 -0.1 3,608,743 - Dsui_3367 0.65 -1.2 3,608,775 - Dsui_3367 0.68 -0.2
Or see this region's nucleotide sequence