Experiment: ALP with Cobalt chloride 0.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3225 and Dsui_3226 are separated by 278 nucleotides Dsui_3226 and Dsui_3227 are separated by 76 nucleotides
Dsui_3225: Dsui_3225 - ribosome small subunit-dependent GTPase A, at 3,463,061 to 3,463,948
_3225
Dsui_3226: Dsui_3226 - putative SAM-dependent methyltransferase, at 3,464,227 to 3,465,186
_3226
Dsui_3227: Dsui_3227 - 2-isopropylmalate synthase, at 3,465,263 to 3,466,945
_3227
Position (kb)
3464
3465
3466 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3463.966 kb on - strand at 3464.058 kb on + strand at 3464.206 kb on + strand at 3464.263 kb on + strand at 3464.324 kb on + strand, within Dsui_3226 at 3464.372 kb on + strand, within Dsui_3226 at 3464.395 kb on - strand, within Dsui_3226 at 3464.486 kb on - strand, within Dsui_3226 at 3464.667 kb on - strand, within Dsui_3226 at 3464.681 kb on - strand at 3464.791 kb on + strand, within Dsui_3226 at 3464.965 kb on + strand, within Dsui_3226 at 3464.990 kb on + strand, within Dsui_3226 at 3464.998 kb on + strand, within Dsui_3226 at 3465.052 kb on + strand, within Dsui_3226 at 3465.052 kb on + strand at 3465.060 kb on - strand, within Dsui_3226 at 3465.071 kb on - strand at 3465.104 kb on + strand at 3465.279 kb on + strand at 3465.330 kb on - strand at 3465.415 kb on - strand at 3465.578 kb on + strand, within Dsui_3227 at 3465.586 kb on - strand, within Dsui_3227 at 3465.608 kb on - strand, within Dsui_3227 at 3465.612 kb on - strand, within Dsui_3227 at 3465.637 kb on + strand, within Dsui_3227 at 3465.659 kb on - strand, within Dsui_3227 at 3465.697 kb on + strand at 3465.982 kb on - strand, within Dsui_3227 at 3466.071 kb on - strand, within Dsui_3227
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cobalt chloride 0.25 mM remove 3,463,966 - +0.7 3,464,058 + -0.7 3,464,206 + -0.9 3,464,263 + -0.3 3,464,324 + Dsui_3226 0.10 +0.7 3,464,372 + Dsui_3226 0.15 +0.7 3,464,395 - Dsui_3226 0.17 -0.9 3,464,486 - Dsui_3226 0.27 -1.6 3,464,667 - Dsui_3226 0.46 -2.5 3,464,681 - +0.7 3,464,791 + Dsui_3226 0.59 -1.9 3,464,965 + Dsui_3226 0.77 -0.9 3,464,990 + Dsui_3226 0.79 -0.3 3,464,998 + Dsui_3226 0.80 -2.3 3,465,052 + Dsui_3226 0.86 -0.7 3,465,052 + +2.3 3,465,060 - Dsui_3226 0.87 -0.9 3,465,071 - +0.7 3,465,104 + -2.3 3,465,279 + -0.9 3,465,330 - +0.0 3,465,415 - -0.9 3,465,578 + Dsui_3227 0.19 -0.3 3,465,586 - Dsui_3227 0.19 -0.4 3,465,608 - Dsui_3227 0.20 -0.9 3,465,612 - Dsui_3227 0.21 -1.8 3,465,637 + Dsui_3227 0.22 -0.9 3,465,659 - Dsui_3227 0.24 -0.4 3,465,697 + +0.7 3,465,982 - Dsui_3227 0.43 -0.5 3,466,071 - Dsui_3227 0.48 -0.8
Or see this region's nucleotide sequence