Experiment: ALP with Cobalt chloride 0.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3170 and Dsui_3171 are separated by 579 nucleotides Dsui_3171 and Dsui_3172 are separated by 91 nucleotides
Dsui_3170: Dsui_3170 - PilZ domain-containing protein, at 3,399,380 to 3,400,111
_3170
Dsui_3171: Dsui_3171 - putative protein-disulfide isomerase, at 3,400,691 to 3,401,347
_3171
Dsui_3172: Dsui_3172 - Zn-dependent hydrolase, glyoxylase, at 3,401,439 to 3,402,341
_3172
Position (kb)
3400
3401
3402 Strain fitness (log2 ratio)
-2
-1
0
1 at 3399.729 kb on + strand, within Dsui_3170 at 3399.762 kb on - strand at 3399.887 kb on - strand, within Dsui_3170 at 3399.936 kb on - strand, within Dsui_3170 at 3399.972 kb on + strand, within Dsui_3170 at 3399.994 kb on - strand at 3400.043 kb on + strand at 3400.051 kb on - strand at 3400.151 kb on + strand at 3400.160 kb on - strand at 3400.235 kb on - strand at 3400.253 kb on + strand at 3400.253 kb on + strand at 3400.261 kb on - strand at 3400.261 kb on - strand at 3400.261 kb on - strand at 3400.316 kb on - strand at 3400.321 kb on + strand at 3400.373 kb on - strand at 3400.402 kb on + strand at 3400.406 kb on + strand at 3400.409 kb on - strand at 3400.409 kb on - strand at 3400.418 kb on + strand at 3400.418 kb on + strand at 3400.418 kb on + strand at 3400.419 kb on + strand at 3400.564 kb on - strand at 3400.575 kb on - strand at 3400.590 kb on - strand at 3400.645 kb on + strand at 3400.688 kb on + strand at 3400.696 kb on - strand at 3400.831 kb on - strand, within Dsui_3171 at 3400.879 kb on - strand, within Dsui_3171 at 3400.946 kb on - strand, within Dsui_3171 at 3401.021 kb on + strand at 3401.173 kb on - strand at 3401.179 kb on - strand, within Dsui_3171 at 3401.191 kb on + strand at 3401.332 kb on + strand at 3401.342 kb on + strand at 3401.478 kb on + strand at 3401.486 kb on - strand at 3401.558 kb on - strand at 3401.739 kb on - strand at 3401.798 kb on + strand at 3401.890 kb on - strand at 3401.989 kb on + strand, within Dsui_3172 at 3401.999 kb on + strand at 3402.000 kb on + strand at 3402.140 kb on - strand at 3402.140 kb on - strand at 3402.150 kb on - strand, within Dsui_3172 at 3402.157 kb on + strand at 3402.191 kb on + strand, within Dsui_3172 at 3402.219 kb on - strand at 3402.228 kb on - strand at 3402.236 kb on + strand at 3402.288 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cobalt chloride 0.25 mM remove 3,399,729 + Dsui_3170 0.48 -1.4 3,399,762 - +0.6 3,399,887 - Dsui_3170 0.69 +0.6 3,399,936 - Dsui_3170 0.76 +0.6 3,399,972 + Dsui_3170 0.81 -1.0 3,399,994 - +0.6 3,400,043 + +0.1 3,400,051 - +0.6 3,400,151 + -1.0 3,400,160 - +0.6 3,400,235 - +0.6 3,400,253 + -1.0 3,400,253 + -0.4 3,400,261 - -0.4 3,400,261 - +0.6 3,400,261 - +0.6 3,400,316 - -1.7 3,400,321 + -1.4 3,400,373 - -1.0 3,400,402 + -0.7 3,400,406 + -0.4 3,400,409 - -0.4 3,400,409 - -0.4 3,400,418 + +0.6 3,400,418 + +0.6 3,400,418 + +0.6 3,400,419 + +0.6 3,400,564 - +0.6 3,400,575 - -1.0 3,400,590 - +0.6 3,400,645 + -0.4 3,400,688 + +0.6 3,400,696 - -1.0 3,400,831 - Dsui_3171 0.21 -2.0 3,400,879 - Dsui_3171 0.29 -1.7 3,400,946 - Dsui_3171 0.39 -1.4 3,401,021 + +0.6 3,401,173 - +0.6 3,401,179 - Dsui_3171 0.74 -0.4 3,401,191 + -1.4 3,401,332 + +0.6 3,401,342 + +0.6 3,401,478 + -1.4 3,401,486 - +0.6 3,401,558 - +0.6 3,401,739 - -0.4 3,401,798 + +0.6 3,401,890 - +0.6 3,401,989 + Dsui_3172 0.61 +0.6 3,401,999 + +0.6 3,402,000 + +0.6 3,402,140 - +0.6 3,402,140 - +0.6 3,402,150 - Dsui_3172 0.79 +0.6 3,402,157 + +0.6 3,402,191 + Dsui_3172 0.83 -1.4 3,402,219 - +0.6 3,402,228 - -0.4 3,402,236 + +0.6 3,402,288 + -0.4
Or see this region's nucleotide sequence