Strain Fitness in Dechlorosoma suillum PS around Dsui_3039

Experiment: ALP with Cobalt chloride 0.25 mM

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntDsui_3038 and Dsui_3039 are separated by 20 nucleotidesDsui_3039 and Dsui_3040 are separated by 6 nucleotidesDsui_3040 and Dsui_3041 are separated by 54 nucleotidesDsui_3041 and Dsui_3042 are separated by 11 nucleotides Dsui_3038: Dsui_3038 - proton-translocating NADH-quinone oxidoreductase, chain M, at 3,253,219 to 3,254,700 _3038 Dsui_3039: Dsui_3039 - proton-translocating NADH-quinone oxidoreductase, chain L, at 3,254,721 to 3,256,745 _3039 Dsui_3040: Dsui_3040 - NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K), at 3,256,752 to 3,257,057 _3040 Dsui_3041: Dsui_3041 - NADH:ubiquinone oxidoreductase subunit 6 (chain J), at 3,257,112 to 3,257,714 _3041 Dsui_3042: Dsui_3042 - NADH-quinone oxidoreductase, chain I, at 3,257,726 to 3,258,214 _3042 Position (kb) 3254 3255 3256 3257Strain fitness (log2 ratio) -1 0 1at 3257.118 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Cobalt chloride 0.25 mM
remove
3,257,118 - -0.7

Or see this region's nucleotide sequence