Experiment: ALP with Cobalt chloride 0.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3023 and Dsui_3024 are separated by 9 nucleotides Dsui_3024 and Dsui_3025 are separated by 82 nucleotides Dsui_3025 and Dsui_3026 are separated by 110 nucleotides
Dsui_3023: Dsui_3023 - phosphate/sulfate permease, at 3,235,141 to 3,236,148
_3023
Dsui_3024: Dsui_3024 - phosphate transport regulator related to PhoU, at 3,236,158 to 3,236,781
_3024
Dsui_3025: Dsui_3025 - hypothetical protein, at 3,236,864 to 3,237,610
_3025
Dsui_3026: Dsui_3026 - hydrogenase maturation protease, at 3,237,721 to 3,238,218
_3026
Position (kb)
3236
3237 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3235.198 kb on - strand at 3235.258 kb on - strand, within Dsui_3023 at 3235.258 kb on - strand, within Dsui_3023 at 3235.441 kb on + strand, within Dsui_3023 at 3235.490 kb on + strand, within Dsui_3023 at 3235.498 kb on - strand, within Dsui_3023 at 3235.510 kb on + strand, within Dsui_3023 at 3235.578 kb on + strand, within Dsui_3023 at 3235.586 kb on - strand, within Dsui_3023 at 3235.679 kb on - strand, within Dsui_3023 at 3235.744 kb on - strand, within Dsui_3023 at 3235.761 kb on + strand, within Dsui_3023 at 3235.777 kb on - strand, within Dsui_3023 at 3235.857 kb on - strand, within Dsui_3023 at 3236.014 kb on - strand, within Dsui_3023 at 3236.156 kb on + strand at 3236.251 kb on - strand, within Dsui_3024 at 3236.276 kb on - strand, within Dsui_3024 at 3236.362 kb on - strand, within Dsui_3024 at 3236.376 kb on + strand, within Dsui_3024 at 3236.522 kb on - strand, within Dsui_3024 at 3236.545 kb on + strand, within Dsui_3024 at 3236.681 kb on + strand, within Dsui_3024 at 3236.710 kb on + strand, within Dsui_3024 at 3236.710 kb on + strand, within Dsui_3024 at 3236.710 kb on + strand, within Dsui_3024 at 3236.712 kb on - strand, within Dsui_3024 at 3236.718 kb on - strand, within Dsui_3024 at 3236.744 kb on + strand at 3236.752 kb on - strand at 3236.909 kb on - strand at 3237.269 kb on - strand, within Dsui_3025 at 3237.311 kb on + strand at 3237.377 kb on + strand at 3237.613 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cobalt chloride 0.25 mM remove 3,235,198 - -2.0 3,235,258 - Dsui_3023 0.12 -2.4 3,235,258 - Dsui_3023 0.12 -2.4 3,235,441 + Dsui_3023 0.30 -1.6 3,235,490 + Dsui_3023 0.35 -1.9 3,235,498 - Dsui_3023 0.35 -2.8 3,235,510 + Dsui_3023 0.37 -0.3 3,235,578 + Dsui_3023 0.43 -0.9 3,235,586 - Dsui_3023 0.44 -2.6 3,235,679 - Dsui_3023 0.53 -2.0 3,235,744 - Dsui_3023 0.60 -2.1 3,235,761 + Dsui_3023 0.62 -0.3 3,235,777 - Dsui_3023 0.63 -2.2 3,235,857 - Dsui_3023 0.71 -2.1 3,236,014 - Dsui_3023 0.87 -2.0 3,236,156 + -1.3 3,236,251 - Dsui_3024 0.15 -2.2 3,236,276 - Dsui_3024 0.19 -2.1 3,236,362 - Dsui_3024 0.33 -2.0 3,236,376 + Dsui_3024 0.35 -1.3 3,236,522 - Dsui_3024 0.58 -1.7 3,236,545 + Dsui_3024 0.62 +0.7 3,236,681 + Dsui_3024 0.84 -0.3 3,236,710 + Dsui_3024 0.88 +0.7 3,236,710 + Dsui_3024 0.88 +0.7 3,236,710 + Dsui_3024 0.88 +0.7 3,236,712 - Dsui_3024 0.89 -2.4 3,236,718 - Dsui_3024 0.90 -1.8 3,236,744 + -0.9 3,236,752 - -1.8 3,236,909 - +0.7 3,237,269 - Dsui_3025 0.54 +0.7 3,237,311 + +0.7 3,237,377 + -0.3 3,237,613 - +0.7
Or see this region's nucleotide sequence