Strain Fitness in Dechlorosoma suillum PS around Dsui_3024

Experiment: ALP with Cobalt chloride 0.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_3023 and Dsui_3024 are separated by 9 nucleotidesDsui_3024 and Dsui_3025 are separated by 82 nucleotidesDsui_3025 and Dsui_3026 are separated by 110 nucleotides Dsui_3023: Dsui_3023 - phosphate/sulfate permease, at 3,235,141 to 3,236,148 _3023 Dsui_3024: Dsui_3024 - phosphate transport regulator related to PhoU, at 3,236,158 to 3,236,781 _3024 Dsui_3025: Dsui_3025 - hypothetical protein, at 3,236,864 to 3,237,610 _3025 Dsui_3026: Dsui_3026 - hydrogenase maturation protease, at 3,237,721 to 3,238,218 _3026 Position (kb) 3236 3237Strain fitness (log2 ratio) -3 -2 -1 0 1at 3235.198 kb on - strandat 3235.258 kb on - strand, within Dsui_3023at 3235.258 kb on - strand, within Dsui_3023at 3235.441 kb on + strand, within Dsui_3023at 3235.490 kb on + strand, within Dsui_3023at 3235.498 kb on - strand, within Dsui_3023at 3235.510 kb on + strand, within Dsui_3023at 3235.578 kb on + strand, within Dsui_3023at 3235.586 kb on - strand, within Dsui_3023at 3235.679 kb on - strand, within Dsui_3023at 3235.744 kb on - strand, within Dsui_3023at 3235.761 kb on + strand, within Dsui_3023at 3235.777 kb on - strand, within Dsui_3023at 3235.857 kb on - strand, within Dsui_3023at 3236.014 kb on - strand, within Dsui_3023at 3236.156 kb on + strandat 3236.251 kb on - strand, within Dsui_3024at 3236.276 kb on - strand, within Dsui_3024at 3236.362 kb on - strand, within Dsui_3024at 3236.376 kb on + strand, within Dsui_3024at 3236.522 kb on - strand, within Dsui_3024at 3236.545 kb on + strand, within Dsui_3024at 3236.681 kb on + strand, within Dsui_3024at 3236.710 kb on + strand, within Dsui_3024at 3236.710 kb on + strand, within Dsui_3024at 3236.710 kb on + strand, within Dsui_3024at 3236.712 kb on - strand, within Dsui_3024at 3236.718 kb on - strand, within Dsui_3024at 3236.744 kb on + strandat 3236.752 kb on - strandat 3236.909 kb on - strandat 3237.269 kb on - strand, within Dsui_3025at 3237.311 kb on + strandat 3237.377 kb on + strandat 3237.613 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Cobalt chloride 0.25 mM
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3,235,198 - -2.0
3,235,258 - Dsui_3023 0.12 -2.4
3,235,258 - Dsui_3023 0.12 -2.4
3,235,441 + Dsui_3023 0.30 -1.6
3,235,490 + Dsui_3023 0.35 -1.9
3,235,498 - Dsui_3023 0.35 -2.8
3,235,510 + Dsui_3023 0.37 -0.3
3,235,578 + Dsui_3023 0.43 -0.9
3,235,586 - Dsui_3023 0.44 -2.6
3,235,679 - Dsui_3023 0.53 -2.0
3,235,744 - Dsui_3023 0.60 -2.1
3,235,761 + Dsui_3023 0.62 -0.3
3,235,777 - Dsui_3023 0.63 -2.2
3,235,857 - Dsui_3023 0.71 -2.1
3,236,014 - Dsui_3023 0.87 -2.0
3,236,156 + -1.3
3,236,251 - Dsui_3024 0.15 -2.2
3,236,276 - Dsui_3024 0.19 -2.1
3,236,362 - Dsui_3024 0.33 -2.0
3,236,376 + Dsui_3024 0.35 -1.3
3,236,522 - Dsui_3024 0.58 -1.7
3,236,545 + Dsui_3024 0.62 +0.7
3,236,681 + Dsui_3024 0.84 -0.3
3,236,710 + Dsui_3024 0.88 +0.7
3,236,710 + Dsui_3024 0.88 +0.7
3,236,710 + Dsui_3024 0.88 +0.7
3,236,712 - Dsui_3024 0.89 -2.4
3,236,718 - Dsui_3024 0.90 -1.8
3,236,744 + -0.9
3,236,752 - -1.8
3,236,909 - +0.7
3,237,269 - Dsui_3025 0.54 +0.7
3,237,311 + +0.7
3,237,377 + -0.3
3,237,613 - +0.7

Or see this region's nucleotide sequence