Experiment: ALP with Cobalt chloride 0.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2856 and Dsui_2857 are separated by 101 nucleotides Dsui_2857 and Dsui_2858 overlap by 8 nucleotides
Dsui_2856: Dsui_2856 - methyl-accepting chemotaxis protein, at 3,044,547 to 3,046,568
_2856
Dsui_2857: Dsui_2857 - lipoprotein releasing system, ATP-binding protein, at 3,046,670 to 3,047,419
_2857
Dsui_2858: Dsui_2858 - lipoprotein releasing system, transmembrane protein, LolC/E family, at 3,047,412 to 3,048,659
_2858
Position (kb)
3046
3047
3048 Strain fitness (log2 ratio)
-1
0
1 at 3045.706 kb on + strand, within Dsui_2856 at 3045.714 kb on - strand, within Dsui_2856 at 3045.714 kb on - strand, within Dsui_2856 at 3045.714 kb on - strand, within Dsui_2856 at 3045.783 kb on - strand, within Dsui_2856 at 3045.829 kb on - strand, within Dsui_2856 at 3046.044 kb on + strand at 3046.081 kb on - strand, within Dsui_2856 at 3046.091 kb on + strand, within Dsui_2856 at 3046.111 kb on - strand, within Dsui_2856 at 3046.117 kb on - strand, within Dsui_2856 at 3046.136 kb on - strand, within Dsui_2856 at 3046.302 kb on - strand, within Dsui_2856 at 3046.355 kb on + strand at 3046.363 kb on - strand, within Dsui_2856 at 3046.461 kb on + strand at 3046.518 kb on + strand at 3046.530 kb on + strand at 3046.538 kb on - strand at 3046.538 kb on - strand at 3046.585 kb on - strand at 3046.590 kb on - strand at 3046.590 kb on - strand at 3047.417 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cobalt chloride 0.25 mM remove 3,045,706 + Dsui_2856 0.57 -0.2 3,045,714 - Dsui_2856 0.58 -0.5 3,045,714 - Dsui_2856 0.58 -0.4 3,045,714 - Dsui_2856 0.58 -0.5 3,045,783 - Dsui_2856 0.61 -0.2 3,045,829 - Dsui_2856 0.63 +0.0 3,046,044 + +0.8 3,046,081 - Dsui_2856 0.76 +0.2 3,046,091 + Dsui_2856 0.76 +0.8 3,046,111 - Dsui_2856 0.77 -0.1 3,046,117 - Dsui_2856 0.78 -0.6 3,046,136 - Dsui_2856 0.79 -0.6 3,046,302 - Dsui_2856 0.87 +0.1 3,046,355 + +0.8 3,046,363 - Dsui_2856 0.90 -0.5 3,046,461 + -0.2 3,046,518 + +0.8 3,046,530 + -0.8 3,046,538 - -0.6 3,046,538 - -1.5 3,046,585 - -0.8 3,046,590 - -0.0 3,046,590 - +0.1 3,047,417 - -0.3
Or see this region's nucleotide sequence