Experiment: ALP with Cobalt chloride 0.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2786 and Dsui_2787 are separated by 346 nucleotides
Dsui_2786: Dsui_2786 - type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit, at 2,955,586 to 2,957,559
_2786
Dsui_2787: Dsui_2787 - membrane carboxypeptidase/penicillin-binding protein, at 2,957,906 to 2,960,278
_2787
Position (kb)
2957
2958
2959
2960
2961 Strain fitness (log2 ratio)
-2
-1
0
1 at 2957.615 kb on - strand at 2957.710 kb on - strand at 2957.854 kb on + strand at 2958.007 kb on - strand at 2958.095 kb on + strand at 2958.284 kb on + strand at 2958.375 kb on + strand at 2958.375 kb on + strand at 2958.393 kb on + strand, within Dsui_2787 at 2958.401 kb on - strand, within Dsui_2787 at 2958.431 kb on + strand, within Dsui_2787 at 2958.490 kb on + strand, within Dsui_2787 at 2958.561 kb on + strand, within Dsui_2787 at 2958.694 kb on - strand, within Dsui_2787 at 2958.734 kb on + strand at 2958.845 kb on + strand, within Dsui_2787 at 2958.845 kb on + strand, within Dsui_2787 at 2958.852 kb on - strand at 2959.004 kb on + strand at 2959.037 kb on - strand, within Dsui_2787 at 2959.128 kb on + strand, within Dsui_2787 at 2959.200 kb on + strand at 2959.218 kb on - strand, within Dsui_2787 at 2959.400 kb on - strand at 2959.400 kb on - strand at 2959.471 kb on + strand, within Dsui_2787 at 2959.479 kb on - strand, within Dsui_2787 at 2959.512 kb on + strand, within Dsui_2787 at 2959.520 kb on - strand, within Dsui_2787 at 2959.590 kb on + strand at 2959.590 kb on + strand, within Dsui_2787 at 2959.702 kb on + strand, within Dsui_2787 at 2959.821 kb on + strand, within Dsui_2787 at 2959.837 kb on + strand at 2959.886 kb on + strand at 2959.902 kb on + strand, within Dsui_2787 at 2959.914 kb on - strand, within Dsui_2787 at 2959.967 kb on - strand, within Dsui_2787 at 2960.059 kb on - strand at 2960.115 kb on - strand at 2960.390 kb on + strand at 2960.541 kb on + strand at 2960.583 kb on - strand at 2960.618 kb on - strand at 2960.657 kb on + strand at 2960.662 kb on - strand at 2960.674 kb on + strand at 2960.785 kb on - strand at 2960.785 kb on - strand at 2960.895 kb on - strand at 2960.895 kb on - strand at 2960.895 kb on - strand at 2960.919 kb on - strand at 2960.961 kb on - strand at 2960.961 kb on - strand at 2961.025 kb on - strand at 2961.140 kb on - strand at 2961.140 kb on - strand at 2961.237 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cobalt chloride 0.25 mM remove 2,957,615 - -0.1 2,957,710 - -0.8 2,957,854 + +0.8 2,958,007 - -0.2 2,958,095 + -0.2 2,958,284 + +0.8 2,958,375 + -0.2 2,958,375 + +0.8 2,958,393 + Dsui_2787 0.21 -0.8 2,958,401 - Dsui_2787 0.21 -0.8 2,958,431 + Dsui_2787 0.22 -0.8 2,958,490 + Dsui_2787 0.25 +0.8 2,958,561 + Dsui_2787 0.28 -0.2 2,958,694 - Dsui_2787 0.33 +0.8 2,958,734 + +0.8 2,958,845 + Dsui_2787 0.40 -1.5 2,958,845 + Dsui_2787 0.40 -0.2 2,958,852 - +0.8 2,959,004 + -0.2 2,959,037 - Dsui_2787 0.48 -0.2 2,959,128 + Dsui_2787 0.51 -0.2 2,959,200 + -0.8 2,959,218 - Dsui_2787 0.55 -0.8 2,959,400 - +0.8 2,959,400 - -0.2 2,959,471 + Dsui_2787 0.66 -2.4 2,959,479 - Dsui_2787 0.66 -0.8 2,959,512 + Dsui_2787 0.68 +0.8 2,959,520 - Dsui_2787 0.68 -1.2 2,959,590 + +0.8 2,959,590 + Dsui_2787 0.71 -1.2 2,959,702 + Dsui_2787 0.76 -0.8 2,959,821 + Dsui_2787 0.81 +0.8 2,959,837 + +0.8 2,959,886 + +0.8 2,959,902 + Dsui_2787 0.84 -1.8 2,959,914 - Dsui_2787 0.85 -0.2 2,959,967 - Dsui_2787 0.87 -0.8 2,960,059 - +0.8 2,960,115 - +0.8 2,960,390 + -0.8 2,960,541 + -1.2 2,960,583 - -0.2 2,960,618 - +0.8 2,960,657 + +0.8 2,960,662 - +0.8 2,960,674 + -1.2 2,960,785 - +0.8 2,960,785 - +0.8 2,960,895 - -1.2 2,960,895 - -0.8 2,960,895 - -0.2 2,960,919 - +0.8 2,960,961 - +0.8 2,960,961 - -0.2 2,961,025 - -1.5 2,961,140 - -0.2 2,961,140 - +0.8 2,961,237 - +0.8
Or see this region's nucleotide sequence