Strain Fitness in Dechlorosoma suillum PS around Dsui_2518

Experiment: ALP with Cobalt chloride 0.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2517 and Dsui_2518 are separated by 119 nucleotidesDsui_2518 and Dsui_2519 are separated by 45 nucleotides Dsui_2517: Dsui_2517 - transposase, at 2,667,970 to 2,668,926 _2517 Dsui_2518: Dsui_2518 - hypothetical protein, at 2,669,046 to 2,669,519 _2518 Dsui_2519: Dsui_2519 - methyl-accepting chemotaxis protein, at 2,669,565 to 2,671,214 _2519 Position (kb) 2669 2670Strain fitness (log2 ratio) -2 -1 0 1at 2669.130 kb on + strand, within Dsui_2518at 2669.156 kb on + strand, within Dsui_2518at 2669.220 kb on - strand, within Dsui_2518at 2669.234 kb on - strand, within Dsui_2518at 2669.258 kb on + strandat 2669.386 kb on - strand, within Dsui_2518at 2669.403 kb on + strand, within Dsui_2518at 2669.692 kb on - strandat 2669.806 kb on + strandat 2669.893 kb on + strand, within Dsui_2519at 2669.901 kb on - strand, within Dsui_2519at 2670.126 kb on - strand, within Dsui_2519at 2670.222 kb on - strand, within Dsui_2519at 2670.254 kb on - strand, within Dsui_2519at 2670.306 kb on + strand, within Dsui_2519at 2670.400 kb on - strand, within Dsui_2519at 2670.442 kb on - strand, within Dsui_2519at 2670.451 kb on - strand, within Dsui_2519at 2670.490 kb on + strandat 2670.508 kb on - strand, within Dsui_2519

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Cobalt chloride 0.25 mM
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2,669,130 + Dsui_2518 0.18 -0.2
2,669,156 + Dsui_2518 0.23 -0.8
2,669,220 - Dsui_2518 0.37 -0.8
2,669,234 - Dsui_2518 0.40 -1.8
2,669,258 + +0.8
2,669,386 - Dsui_2518 0.72 -1.8
2,669,403 + Dsui_2518 0.75 -1.2
2,669,692 - -2.7
2,669,806 + +0.8
2,669,893 + Dsui_2519 0.20 -0.2
2,669,901 - Dsui_2519 0.20 +0.8
2,670,126 - Dsui_2519 0.34 +0.8
2,670,222 - Dsui_2519 0.40 -1.8
2,670,254 - Dsui_2519 0.42 -0.2
2,670,306 + Dsui_2519 0.45 -0.2
2,670,400 - Dsui_2519 0.51 +0.8
2,670,442 - Dsui_2519 0.53 -1.2
2,670,451 - Dsui_2519 0.54 +0.8
2,670,490 + +0.8
2,670,508 - Dsui_2519 0.57 -0.2

Or see this region's nucleotide sequence