Strain Fitness in Dechlorosoma suillum PS around Dsui_2422

Experiment: ALP with Cobalt chloride 0.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2421 and Dsui_2422 are separated by 47 nucleotidesDsui_2422 and Dsui_2423 are separated by 270 nucleotides Dsui_2421: Dsui_2421 - EAL domain-containing protein, at 2,579,922 to 2,581,223 _2421 Dsui_2422: Dsui_2422 - truncated hemoglobin, at 2,581,271 to 2,581,657 _2422 Dsui_2423: Dsui_2423 - GTP-binding protein TypA/BipA, at 2,581,928 to 2,583,742 _2423 Position (kb) 2581 2582Strain fitness (log2 ratio) -2 -1 0 1 2at 2580.281 kb on - strand, within Dsui_2421at 2580.291 kb on + strand, within Dsui_2421at 2580.318 kb on - strand, within Dsui_2421at 2580.323 kb on + strand, within Dsui_2421at 2580.355 kb on - strand, within Dsui_2421at 2580.383 kb on + strand, within Dsui_2421at 2580.391 kb on - strand, within Dsui_2421at 2580.406 kb on + strand, within Dsui_2421at 2580.414 kb on - strand, within Dsui_2421at 2580.427 kb on - strand, within Dsui_2421at 2580.501 kb on - strand, within Dsui_2421at 2580.502 kb on + strand, within Dsui_2421at 2580.539 kb on - strand, within Dsui_2421at 2580.642 kb on - strand, within Dsui_2421at 2580.695 kb on - strand, within Dsui_2421at 2580.738 kb on + strand, within Dsui_2421at 2580.809 kb on - strand, within Dsui_2421at 2580.841 kb on - strand, within Dsui_2421at 2580.937 kb on - strand, within Dsui_2421at 2580.958 kb on + strand, within Dsui_2421at 2580.958 kb on + strand, within Dsui_2421at 2580.976 kb on + strand, within Dsui_2421at 2580.989 kb on + strand, within Dsui_2421at 2581.029 kb on + strand, within Dsui_2421at 2581.153 kb on + strandat 2581.181 kb on + strandat 2581.198 kb on - strandat 2581.198 kb on - strandat 2581.307 kb on + strandat 2581.398 kb on + strand, within Dsui_2422at 2581.406 kb on - strandat 2581.407 kb on + strand, within Dsui_2422at 2581.413 kb on + strandat 2581.451 kb on - strand, within Dsui_2422at 2581.530 kb on + strand, within Dsui_2422at 2581.556 kb on + strand, within Dsui_2422at 2581.563 kb on + strand, within Dsui_2422at 2581.749 kb on + strandat 2581.842 kb on + strandat 2581.886 kb on + strandat 2581.886 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Cobalt chloride 0.25 mM
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2,580,281 - Dsui_2421 0.28 +0.3
2,580,291 + Dsui_2421 0.28 +0.2
2,580,318 - Dsui_2421 0.30 -0.1
2,580,323 + Dsui_2421 0.31 -0.4
2,580,355 - Dsui_2421 0.33 -0.2
2,580,383 + Dsui_2421 0.35 +0.2
2,580,391 - Dsui_2421 0.36 +0.1
2,580,406 + Dsui_2421 0.37 -2.4
2,580,414 - Dsui_2421 0.38 -0.4
2,580,427 - Dsui_2421 0.39 +0.2
2,580,501 - Dsui_2421 0.44 -0.5
2,580,502 + Dsui_2421 0.45 +1.8
2,580,539 - Dsui_2421 0.47 -0.4
2,580,642 - Dsui_2421 0.55 -0.5
2,580,695 - Dsui_2421 0.59 +0.1
2,580,738 + Dsui_2421 0.63 +0.8
2,580,809 - Dsui_2421 0.68 -0.8
2,580,841 - Dsui_2421 0.71 -0.4
2,580,937 - Dsui_2421 0.78 +0.1
2,580,958 + Dsui_2421 0.80 -0.4
2,580,958 + Dsui_2421 0.80 -0.5
2,580,976 + Dsui_2421 0.81 -1.6
2,580,989 + Dsui_2421 0.82 +1.8
2,581,029 + Dsui_2421 0.85 -1.1
2,581,153 + -1.2
2,581,181 + -0.6
2,581,198 - -0.5
2,581,198 - -1.1
2,581,307 + -0.2
2,581,398 + Dsui_2422 0.33 -0.5
2,581,406 - -1.6
2,581,407 + Dsui_2422 0.35 -0.5
2,581,413 + -1.2
2,581,451 - Dsui_2422 0.47 -0.8
2,581,530 + Dsui_2422 0.67 -0.4
2,581,556 + Dsui_2422 0.74 -1.0
2,581,563 + Dsui_2422 0.75 -1.6
2,581,749 + -2.0
2,581,842 + -0.2
2,581,886 + -1.2
2,581,886 + -0.6

Or see this region's nucleotide sequence