Experiment: ALP with Cobalt chloride 0.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2387 and Dsui_2388 overlap by 14 nucleotides Dsui_2388 and Dsui_2389 are separated by 23 nucleotides Dsui_2389 and Dsui_2390 are separated by 101 nucleotides Dsui_2390 and Dsui_2391 overlap by 4 nucleotides
Dsui_2387: Dsui_2387 - hypothetical protein, at 2,540,017 to 2,540,622
_2387
Dsui_2388: Dsui_2388 - putative dioxygenase, at 2,540,609 to 2,541,415
_2388
Dsui_2389: Dsui_2389 - putative membrane protein, at 2,541,439 to 2,542,710
_2389
Dsui_2390: Dsui_2390 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, at 2,542,812 to 2,543,528
_2390
Dsui_2391: Dsui_2391 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, at 2,543,525 to 2,544,013
_2391
Position (kb)
2541
2542
2543 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2540.559 kb on - strand at 2540.610 kb on + strand at 2540.637 kb on - strand at 2540.855 kb on - strand, within Dsui_2388 at 2540.979 kb on - strand, within Dsui_2388 at 2541.025 kb on + strand at 2541.180 kb on - strand at 2541.506 kb on - strand at 2541.558 kb on - strand at 2541.660 kb on + strand at 2541.774 kb on - strand, within Dsui_2389 at 2541.931 kb on - strand at 2541.960 kb on + strand at 2541.997 kb on - strand, within Dsui_2389 at 2542.019 kb on + strand at 2542.034 kb on + strand at 2542.092 kb on - strand, within Dsui_2389 at 2542.149 kb on - strand, within Dsui_2389 at 2542.181 kb on - strand, within Dsui_2389 at 2542.218 kb on - strand, within Dsui_2389 at 2542.345 kb on - strand, within Dsui_2389 at 2542.374 kb on + strand, within Dsui_2389 at 2542.430 kb on - strand at 2542.579 kb on - strand, within Dsui_2389 at 2542.583 kb on - strand at 2542.583 kb on - strand at 2542.629 kb on - strand at 2542.652 kb on - strand at 2542.652 kb on - strand at 2542.652 kb on - strand at 2542.652 kb on - strand at 2542.652 kb on - strand at 2542.652 kb on - strand at 2542.652 kb on - strand at 2542.786 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cobalt chloride 0.25 mM remove 2,540,559 - +0.8 2,540,610 + +0.8 2,540,637 - -2.7 2,540,855 - Dsui_2388 0.30 -2.2 2,540,979 - Dsui_2388 0.46 -0.2 2,541,025 + -1.2 2,541,180 - +0.8 2,541,506 - -1.5 2,541,558 - -0.8 2,541,660 + -0.2 2,541,774 - Dsui_2389 0.26 -0.2 2,541,931 - +0.8 2,541,960 + +0.8 2,541,997 - Dsui_2389 0.44 -2.9 2,542,019 + -1.2 2,542,034 + +0.8 2,542,092 - Dsui_2389 0.51 -0.8 2,542,149 - Dsui_2389 0.56 -0.2 2,542,181 - Dsui_2389 0.58 -0.8 2,542,218 - Dsui_2389 0.61 +0.8 2,542,345 - Dsui_2389 0.71 -0.8 2,542,374 + Dsui_2389 0.74 -0.8 2,542,430 - +0.8 2,542,579 - Dsui_2389 0.90 -2.7 2,542,583 - -0.2 2,542,583 - -1.8 2,542,629 - +0.8 2,542,652 - -2.4 2,542,652 - +0.8 2,542,652 - +0.8 2,542,652 - +0.8 2,542,652 - +0.8 2,542,652 - -0.8 2,542,652 - +0.8 2,542,786 - -0.8
Or see this region's nucleotide sequence