Experiment: ALP with Cobalt chloride 0.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1973 and Dsui_1974 overlap by 4 nucleotides Dsui_1974 and Dsui_1975 are separated by 11 nucleotides
Dsui_1973: Dsui_1973 - transglutaminase-like enzyme, predicted cysteine protease, at 2,080,859 to 2,082,865
_1973
Dsui_1974: Dsui_1974 - hypothetical protein, at 2,082,862 to 2,083,836
_1974
Dsui_1975: Dsui_1975 - MoxR-like ATPase, at 2,083,848 to 2,084,789
_1975
Position (kb)
2082
2083
2084 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2081.872 kb on - strand, within Dsui_1973 at 2081.872 kb on - strand, within Dsui_1973 at 2081.980 kb on - strand, within Dsui_1973 at 2082.012 kb on - strand, within Dsui_1973 at 2082.117 kb on - strand, within Dsui_1973 at 2082.148 kb on - strand, within Dsui_1973 at 2082.153 kb on + strand at 2082.328 kb on - strand, within Dsui_1973 at 2082.328 kb on - strand at 2082.411 kb on - strand, within Dsui_1973 at 2082.464 kb on - strand at 2082.484 kb on + strand at 2082.488 kb on - strand at 2082.492 kb on - strand, within Dsui_1973 at 2082.497 kb on - strand, within Dsui_1973 at 2082.606 kb on - strand, within Dsui_1973 at 2082.646 kb on - strand, within Dsui_1973 at 2082.704 kb on + strand at 2082.710 kb on + strand at 2082.713 kb on - strand at 2082.767 kb on - strand at 2082.875 kb on - strand at 2082.948 kb on + strand at 2082.991 kb on - strand at 2083.130 kb on - strand, within Dsui_1974 at 2083.276 kb on - strand, within Dsui_1974 at 2083.281 kb on + strand at 2083.413 kb on + strand at 2083.507 kb on - strand, within Dsui_1974 at 2083.513 kb on - strand at 2083.521 kb on + strand, within Dsui_1974 at 2083.529 kb on - strand, within Dsui_1974 at 2083.557 kb on - strand, within Dsui_1974 at 2083.654 kb on + strand at 2083.659 kb on + strand at 2083.662 kb on - strand, within Dsui_1974 at 2083.679 kb on + strand at 2083.701 kb on + strand at 2083.709 kb on + strand at 2083.709 kb on + strand at 2083.717 kb on - strand, within Dsui_1974 at 2083.717 kb on - strand, within Dsui_1974 at 2083.739 kb on + strand at 2083.819 kb on - strand at 2083.854 kb on - strand at 2083.859 kb on - strand at 2083.859 kb on - strand at 2083.894 kb on - strand at 2083.962 kb on - strand, within Dsui_1975 at 2083.971 kb on - strand at 2084.007 kb on - strand, within Dsui_1975 at 2084.032 kb on - strand, within Dsui_1975 at 2084.042 kb on + strand, within Dsui_1975 at 2084.104 kb on - strand, within Dsui_1975 at 2084.159 kb on + strand, within Dsui_1975 at 2084.225 kb on + strand, within Dsui_1975 at 2084.253 kb on + strand, within Dsui_1975 at 2084.293 kb on - strand, within Dsui_1975 at 2084.293 kb on - strand at 2084.300 kb on + strand, within Dsui_1975 at 2084.335 kb on - strand, within Dsui_1975 at 2084.407 kb on + strand, within Dsui_1975 at 2084.415 kb on - strand, within Dsui_1975 at 2084.475 kb on - strand at 2084.476 kb on - strand, within Dsui_1975 at 2084.485 kb on - strand, within Dsui_1975 at 2084.562 kb on + strand, within Dsui_1975 at 2084.608 kb on - strand, within Dsui_1975 at 2084.613 kb on + strand, within Dsui_1975 at 2084.687 kb on - strand, within Dsui_1975 at 2084.687 kb on - strand, within Dsui_1975 at 2084.692 kb on - strand, within Dsui_1975 at 2084.785 kb on + strand at 2084.792 kb on - strand at 2084.836 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cobalt chloride 0.25 mM remove 2,081,872 - Dsui_1973 0.50 +1.2 2,081,872 - Dsui_1973 0.50 -1.2 2,081,980 - Dsui_1973 0.56 +0.2 2,082,012 - Dsui_1973 0.57 +0.2 2,082,117 - Dsui_1973 0.63 +0.2 2,082,148 - Dsui_1973 0.64 +0.2 2,082,153 + +1.2 2,082,328 - Dsui_1973 0.73 -0.4 2,082,328 - +1.2 2,082,411 - Dsui_1973 0.77 +0.2 2,082,464 - +1.2 2,082,484 + +1.2 2,082,488 - +0.2 2,082,492 - Dsui_1973 0.81 -1.7 2,082,497 - Dsui_1973 0.82 +0.2 2,082,606 - Dsui_1973 0.87 +1.2 2,082,646 - Dsui_1973 0.89 -0.4 2,082,704 + +1.2 2,082,710 + +1.2 2,082,713 - -1.2 2,082,767 - -0.8 2,082,875 - -2.0 2,082,948 + +0.2 2,082,991 - +1.2 2,083,130 - Dsui_1974 0.27 -1.2 2,083,276 - Dsui_1974 0.42 +1.2 2,083,281 + -0.4 2,083,413 + +0.2 2,083,507 - Dsui_1974 0.66 -0.8 2,083,513 - +0.2 2,083,521 + Dsui_1974 0.68 -0.4 2,083,529 - Dsui_1974 0.68 +0.2 2,083,557 - Dsui_1974 0.71 +1.2 2,083,654 + +0.2 2,083,659 + +0.2 2,083,662 - Dsui_1974 0.82 -0.8 2,083,679 + +1.2 2,083,701 + -0.8 2,083,709 + +1.2 2,083,709 + +0.2 2,083,717 - Dsui_1974 0.88 -1.2 2,083,717 - Dsui_1974 0.88 -2.3 2,083,739 + +0.2 2,083,819 - +1.2 2,083,854 - -0.4 2,083,859 - +1.2 2,083,859 - +0.8 2,083,894 - +1.2 2,083,962 - Dsui_1975 0.12 -2.0 2,083,971 - +2.2 2,084,007 - Dsui_1975 0.17 -1.2 2,084,032 - Dsui_1975 0.20 -0.4 2,084,042 + Dsui_1975 0.21 +1.2 2,084,104 - Dsui_1975 0.27 -0.4 2,084,159 + Dsui_1975 0.33 -2.3 2,084,225 + Dsui_1975 0.40 +0.2 2,084,253 + Dsui_1975 0.43 -0.4 2,084,293 - Dsui_1975 0.47 -0.6 2,084,293 - +1.2 2,084,300 + Dsui_1975 0.48 -1.2 2,084,335 - Dsui_1975 0.52 +0.2 2,084,407 + Dsui_1975 0.59 +1.2 2,084,415 - Dsui_1975 0.60 -0.8 2,084,475 - +1.2 2,084,476 - Dsui_1975 0.67 -1.2 2,084,485 - Dsui_1975 0.68 +1.2 2,084,562 + Dsui_1975 0.76 +1.2 2,084,608 - Dsui_1975 0.81 +0.3 2,084,613 + Dsui_1975 0.81 +1.2 2,084,687 - Dsui_1975 0.89 -1.2 2,084,687 - Dsui_1975 0.89 +0.6 2,084,692 - Dsui_1975 0.90 +0.2 2,084,785 + -0.8 2,084,792 - +1.2 2,084,836 + -0.8
Or see this region's nucleotide sequence