Strain Fitness in Dechlorosoma suillum PS around Dsui_1695

Experiment: ALP with Cobalt chloride 0.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_1694 and Dsui_1695 are separated by 30 nucleotidesDsui_1695 and Dsui_1696 are separated by 36 nucleotides Dsui_1694: Dsui_1694 - AAA ATPase, at 1,782,381 to 1,783,679 _1694 Dsui_1695: Dsui_1695 - hypothetical protein, at 1,783,710 to 1,784,069 _1695 Dsui_1696: Dsui_1696 - seryl-tRNA synthetase, at 1,784,106 to 1,785,389 _1696 Position (kb) 1783 1784 1785Strain fitness (log2 ratio) -2 -1 0 1at 1782.727 kb on + strand, within Dsui_1694at 1782.728 kb on - strand, within Dsui_1694at 1782.852 kb on - strand, within Dsui_1694at 1782.941 kb on - strand, within Dsui_1694at 1783.009 kb on + strand, within Dsui_1694at 1783.062 kb on + strand, within Dsui_1694at 1783.114 kb on - strand, within Dsui_1694at 1783.284 kb on + strand, within Dsui_1694at 1783.334 kb on - strand, within Dsui_1694at 1783.343 kb on + strand, within Dsui_1694at 1783.423 kb on + strand, within Dsui_1694at 1783.489 kb on - strandat 1783.501 kb on - strand, within Dsui_1694at 1783.526 kb on - strand, within Dsui_1694at 1783.526 kb on - strand, within Dsui_1694at 1783.697 kb on - strandat 1783.757 kb on - strandat 1783.779 kb on - strand, within Dsui_1695at 1783.789 kb on - strand, within Dsui_1695at 1783.789 kb on - strand, within Dsui_1695at 1783.803 kb on + strand, within Dsui_1695at 1783.828 kb on + strand, within Dsui_1695at 1783.857 kb on + strand, within Dsui_1695at 1783.858 kb on - strand, within Dsui_1695at 1783.858 kb on - strand, within Dsui_1695at 1783.858 kb on - strand, within Dsui_1695at 1783.860 kb on + strand, within Dsui_1695at 1783.870 kb on - strandat 1783.904 kb on - strand, within Dsui_1695at 1783.970 kb on + strand, within Dsui_1695at 1783.984 kb on - strand, within Dsui_1695at 1783.989 kb on - strand, within Dsui_1695

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Cobalt chloride 0.25 mM
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1,782,727 + Dsui_1694 0.27 -0.8
1,782,728 - Dsui_1694 0.27 +0.7
1,782,852 - Dsui_1694 0.36 -0.3
1,782,941 - Dsui_1694 0.43 -0.3
1,783,009 + Dsui_1694 0.48 -0.5
1,783,062 + Dsui_1694 0.52 -0.8
1,783,114 - Dsui_1694 0.56 -2.1
1,783,284 + Dsui_1694 0.70 -0.9
1,783,334 - Dsui_1694 0.73 -0.3
1,783,343 + Dsui_1694 0.74 -0.3
1,783,423 + Dsui_1694 0.80 -0.4
1,783,489 - +0.7
1,783,501 - Dsui_1694 0.86 -0.3
1,783,526 - Dsui_1694 0.88 +0.7
1,783,526 - Dsui_1694 0.88 -1.6
1,783,697 - +0.7
1,783,757 - +0.7
1,783,779 - Dsui_1695 0.19 -1.6
1,783,789 - Dsui_1695 0.22 +0.7
1,783,789 - Dsui_1695 0.22 +0.7
1,783,803 + Dsui_1695 0.26 -0.6
1,783,828 + Dsui_1695 0.33 +0.7
1,783,857 + Dsui_1695 0.41 -0.9
1,783,858 - Dsui_1695 0.41 -2.5
1,783,858 - Dsui_1695 0.41 +0.7
1,783,858 - Dsui_1695 0.41 +0.7
1,783,860 + Dsui_1695 0.42 -1.0
1,783,870 - +0.7
1,783,904 - Dsui_1695 0.54 -2.3
1,783,970 + Dsui_1695 0.72 -0.4
1,783,984 - Dsui_1695 0.76 +0.7
1,783,989 - Dsui_1695 0.78 +0.7

Or see this region's nucleotide sequence